Item | Value |
---|---|
gene id | LOC110529864 |
gene name | LOC106571569 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 35628152 ~ 35632437 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
transcriptional repressor protein YY1-like isoform X1 |
id | description |
---|---|
K09201 | YY; transcription factor YY |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021612484.2 | False | 2211 | mRNA | 0.48 | 5 | 35628152 | 35632424 |
XM_021612482.2 | False | 2258 | mRNA | 0.48 | 6 | 35628152 | 35632426 |
XM_021612483.2 | False | 2227 | mRNA | 0.48 | 5 | 35628152 | 35632428 |
XM_021612481.2 | False | 2280 | mRNA | 0.48 | 6 | 35628152 | 35632436 |
XR_002474446.2 | True | 2163 | mRNA | 0.48 | 7 | 35628152 | 35632437 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110529862 | LOC106571571 | coding | downstream | 58345 | 35553221 ~ 35608497 (-) |
LOC110529861 | LOC106571572 | coding | downstream | 81308 | 35537689 ~ 35546844 (-) |
LOC110529855 | LOC106571575 | coding | downstream | 154300 | 35462273 ~ 35473852 (-) |
LOC110529854 | LOC106571577 | coding | downstream | 199015 | 35426316 ~ 35429137 (-) |
LOC110529851 | prpf39 | coding | downstream | 306347 | 35306928 ~ 35321805 (-) |
LOC110529865 | LOC106571568 | coding | upstream | 1036 | 35633473 ~ 35705333 (-) |
LOC110529866 | LOC106571566 | coding | upstream | 75604 | 35708041 ~ 35798020 (-) |
LOC118936680 | LOC106571560 | coding | upstream | 269214 | 35901651 ~ 35906701 (-) |
LOC110529868 | LOC106571561 | coding | upstream | 283803 | 35916240 ~ 35920906 (-) |
LOC110529870 | LOC106571558 | coding | upstream | 420499 | 36052936 ~ 36059371 (-) |
G701362 | NA | non-coding | downstream | 125507 | 35458052 ~ 35502645 (-) |
G701353 | NA | non-coding | downstream | 216994 | 35410941 ~ 35411158 (-) |
G701291 | NA | non-coding | downstream | 332816 | 35289149 ~ 35295336 (-) |
G701204 | NA | non-coding | downstream | 440149 | 35187594 ~ 35188003 (-) |
G701395 | NA | non-coding | upstream | 27913 | 35660350 ~ 35679252 (-) |
G701486 | NA | non-coding | upstream | 89636 | 35722073 ~ 35722772 (-) |
G701522 | NA | non-coding | upstream | 99804 | 35732241 ~ 35732648 (-) |
G701533 | NA | non-coding | upstream | 129271 | 35761708 ~ 35761938 (-) |
G701536 | NA | non-coding | upstream | 133365 | 35765802 ~ 35766021 (-) |
G701454 | NA | other | downstream | 38275 | 35582998 ~ 35589877 (-) |
ankef1a | LOC106571587 | other | downstream | 1604267 | 34017010 ~ 34029131 (-) |
G699468 | NA | other | downstream | 1675796 | 33943022 ~ 33952356 (-) |
G698356 | NA | other | downstream | 2638091 | 32989245 ~ 32990061 (-) |
G697774 | LOC106571626 | other | downstream | 3128742 | 32498799 ~ 32499410 (-) |
G701618 | LOC106571560 | other | upstream | 268186 | 35900623 ~ 35918175 (-) |
LOC110529880 | LOC106571768 | other | upstream | 1722659 | 37355096 ~ 37361922 (-) |
LOC110530908 | otof | other | upstream | 1856790 | 37474229 ~ 37626960 (-) |
G704702 | NA | other | upstream | 2405288 | 38037725 ~ 38038346 (-) |