Item | Value |
---|---|
gene id | LOC110529865 |
gene name | LOC106571568 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 35633473 ~ 35705333 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: ena/VASP-like protein isoform X6 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036985384.1 | False | 3147 | mRNA | 0.48 | 13 | 35633473 | 35687571 |
XM_036985382.1 | False | 3155 | mRNA | 0.48 | 13 | 35633473 | 35687573 |
XM_036985383.1 | False | 3152 | mRNA | 0.48 | 13 | 35633473 | 35687573 |
XM_036985381.1 | False | 3160 | mRNA | 0.48 | 13 | 35633473 | 35687575 |
XM_036985386.1 | False | 2761 | mRNA | 0.48 | 13 | 35633473 | 35705333 |
TU798044 | False | 1487 | TUCP | 0.53 | 6 | 35641355 | 35687636 |
TU798045 | False | 1316 | TUCP | 0.53 | 6 | 35641355 | 35687465 |
TU798046 | True | 1013 | TUCP | 0.55 | 6 | 35641355 | 35705313 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110529864 | LOC106571569 | coding | downstream | 1036 | 35628152 ~ 35632437 (-) |
LOC110529862 | LOC106571571 | coding | downstream | 63666 | 35553221 ~ 35608497 (-) |
LOC110529861 | LOC106571572 | coding | downstream | 86629 | 35537689 ~ 35546844 (-) |
LOC110529855 | LOC106571575 | coding | downstream | 159621 | 35462273 ~ 35473852 (-) |
LOC110529854 | LOC106571577 | coding | downstream | 204336 | 35426316 ~ 35429137 (-) |
LOC110529866 | LOC106571566 | coding | upstream | 2708 | 35708041 ~ 35798020 (-) |
LOC118936680 | LOC106571560 | coding | upstream | 196318 | 35901651 ~ 35906701 (-) |
LOC110529868 | LOC106571561 | coding | upstream | 210907 | 35916240 ~ 35920906 (-) |
LOC110529870 | LOC106571558 | coding | upstream | 347603 | 36052936 ~ 36059371 (-) |
LOC110529235 | plcb4 | coding | upstream | 358204 | 36063537 ~ 36206480 (-) |
G701362 | NA | non-coding | downstream | 130828 | 35458052 ~ 35502645 (-) |
G701353 | NA | non-coding | downstream | 222315 | 35410941 ~ 35411158 (-) |
G701291 | NA | non-coding | downstream | 338137 | 35289149 ~ 35295336 (-) |
G701204 | NA | non-coding | downstream | 445470 | 35187594 ~ 35188003 (-) |
G701486 | NA | non-coding | upstream | 16740 | 35722073 ~ 35722772 (-) |
G701522 | NA | non-coding | upstream | 26908 | 35732241 ~ 35732648 (-) |
G701533 | NA | non-coding | upstream | 56375 | 35761708 ~ 35761938 (-) |
G701536 | NA | non-coding | upstream | 60469 | 35765802 ~ 35766021 (-) |
G701537 | NA | non-coding | upstream | 60890 | 35766223 ~ 35766438 (-) |
G701454 | NA | other | downstream | 43596 | 35582998 ~ 35589877 (-) |
ankef1a | LOC106571587 | other | downstream | 1609588 | 34017010 ~ 34029131 (-) |
G699468 | NA | other | downstream | 1681117 | 33943022 ~ 33952356 (-) |
G698356 | NA | other | downstream | 2643412 | 32989245 ~ 32990061 (-) |
G697774 | LOC106571626 | other | downstream | 3134063 | 32498799 ~ 32499410 (-) |
G701618 | LOC106571560 | other | upstream | 195290 | 35900623 ~ 35918175 (-) |
LOC110529880 | LOC106571768 | other | upstream | 1649763 | 37355096 ~ 37361922 (-) |
LOC110530908 | otof | other | upstream | 1783894 | 37474229 ~ 37626960 (-) |
G704702 | NA | other | upstream | 2332392 | 38037725 ~ 38038346 (-) |
G704874 | NA | other | upstream | 2608156 | 38313489 ~ 38313803 (-) |