Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529234 |
| gene name | LOC106571562 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 35854960 ~ 35901652 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: mitogen-activated protein kinase-binding protein 1-like |
| id | description |
|---|---|
| K21763 | MAPKBP1; mitogen-activated protein kinase binding protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036985394.1 | False | 4431 | mRNA | 0.54 | 28 | 35854960 | 35891416 |
| XM_036985391.1 | False | 6359 | mRNA | 0.52 | 32 | 35854968 | 35901652 |
| XR_005052867.1 | False | 5382 | mRNA | 0.55 | 31 | 35854969 | 35900757 |
| XR_005052866.1 | False | 5581 | mRNA | 0.54 | 31 | 35854970 | 35900968 |
| XM_036985393.1 | False | 6319 | mRNA | 0.52 | 31 | 35854972 | 35901652 |
| XM_036985390.1 | False | 6356 | mRNA | 0.52 | 32 | 35854974 | 35901652 |
| XM_036985392.1 | True | 6339 | mRNA | 0.52 | 32 | 35854982 | 35901652 |
35,810,000
35,820,000
35,830,000
35,840,000
35,850,000
35,860,000
35,870,000
35,880,000
35,890,000
35,900,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529863 | LOC106571570 | coding | upstream | 258556 | 35574306 ~ 35596404 (+) |
| znf410 | zn410 | coding | upstream | 316623 | 35514934 ~ 35538337 (+) |
| cipcb | LOC106571573 | coding | upstream | 349129 | 35502866 ~ 35505831 (+) |
| LOC110529858 | LOC106571724 | coding | upstream | 352301 | 35489254 ~ 35502659 (+) |
| LOC110529857 | LOC106571574 | coding | upstream | 370354 | 35474492 ~ 35484606 (+) |
| LOC110529869 | LOC106571559 | coding | downstream | 34755 | 35936407 ~ 36051280 (+) |
| LOC118965513 | NA | coding | downstream | 563304 | 36464956 ~ 36467606 (+) |
| fermt1 | LOC106571740 | coding | downstream | 686988 | 36588640 ~ 36604558 (+) |
| trmt6 | trmt6 | coding | downstream | 703916 | 36605568 ~ 36619010 (+) |
| gpcpd1 | LOC106571744 | coding | downstream | 740652 | 36642304 ~ 36662826 (+) |
| G700652 | NA | non-coding | upstream | 287 | 35853550 ~ 35854673 (+) |
| G700827 | LOC106571563 | non-coding | upstream | 8658 | 35845819 ~ 35846302 (+) |
| G700778 | NA | non-coding | upstream | 86374 | 35768355 ~ 35768586 (+) |
| G700777 | NA | non-coding | upstream | 87884 | 35766756 ~ 35767076 (+) |
| G700767 | NA | non-coding | upstream | 100614 | 35754145 ~ 35754346 (+) |
| G701706 | NA | non-coding | downstream | 109116 | 36010768 ~ 36010992 (+) |
| G701708 | NA | non-coding | downstream | 110864 | 36012516 ~ 36012817 (+) |
| G701713 | NA | non-coding | downstream | 121454 | 36023106 ~ 36023309 (+) |
| G701727 | NA | non-coding | downstream | 150102 | 36051754 ~ 36052020 (+) |
| G701642 | NA | non-coding | downstream | 151291 | 36052943 ~ 36077605 (+) |
| G700685 | NA | other | upstream | 240294 | 35613164 ~ 35614666 (+) |
| LOC110529856 | LOC106571576 | other | upstream | 392920 | 35454437 ~ 35462086 (+) |
| G699605 | NA | other | upstream | 1726659 | 34127593 ~ 34128301 (+) |
| G694036 | NA | other | upstream | 6062213 | 29790997 ~ 29792747 (+) |
| cdca4 | LOC106571684 | other | upstream | 6916687 | 28930668 ~ 28939888 (+) |
| G700864 | NA | other | downstream | 2397 | 35904049 ~ 35904698 (+) |
| G702415 | NA | other | downstream | 798786 | 36700438 ~ 36700739 (+) |
| G702687 | NA | other | downstream | 1156693 | 37058345 ~ 37059223 (+) |
| G702817 | LOC106571770 | other | downstream | 1347085 | 37248737 ~ 37249809 (+) |
| G703835 | LOC106584613 | other | downstream | 1869212 | 37770864 ~ 37771635 (+) |
