Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_025785 |
| gene name | hbbe1.3 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 55131289 ~ 55132052 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| hbbe1.3 | Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to act upstream of or within oxygen transport. Predicted to be part of hemoglobin complex. Human ortholog(s) of this gene implicated in sickle cell anemia. Orthologous to human HBE1 (hemoglobin subunit epsilon 1). |
| id | name | namespace |
|---|---|---|
| GO:0015671 | oxygen transport | biological_process |
| GO:0005833 | hemoglobin complex | cellular_component |
| GO:0019825 | oxygen binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0005344 | oxygen carrier activity | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-131120-128 | Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to act upstream of or within oxygen transport. Predicted to be part of hemoglobin complex. Human ortholog(s) of this gene implicated in sickle cell anemia. Orthologous to human HBE1 (hemoglobin subunit epsilon 1). |
| ensembl_id | ENSDARG00000087390 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00050659 | True | 582 | mRNA | 0.48 | 3 | 55131289 | 55132052 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_025784 | hbbe1.2 | coding | upstream | 7850 | 55122662 ~ 55123439 (+) |
| XLOC_025783 | hbbe1.1 | coding | upstream | 16415 | 55114097 ~ 55114874 (+) |
| XLOC_025782 | si:ch211-5k11.8 | coding | upstream | 25323 | 55105066 ~ 55105966 (+) |
| XLOC_025781 | hbaa1 | coding | upstream | 30353 | 55100045 ~ 55100936 (+) |
| XLOC_025780 | hbaa2 | coding | upstream | 36890 | 55093581 ~ 55094399 (+) |
| XLOC_025786 | si:dkey-114l24.2 | coding | downstream | 156148 | 55288200 ~ 55290637 (+) |
| XLOC_025787 | CT583658.1 | coding | downstream | 166991 | 55299043 ~ 55299158 (+) |
| XLOC_025788 | NA | coding | downstream | 254163 | 55386215 ~ 55387657 (+) |
| XLOC_025789 | NA | coding | downstream | 350068 | 55482120 ~ 55488241 (+) |
| XLOC_025790 | NA | coding | downstream | 514821 | 55646873 ~ 55654264 (+) |
| XLOC_025429 | BX649540.1 | misc | upstream | 24882253 | 30248739 ~ 30249036 (+) |
| XLOC_025776 | NA | non-coding | upstream | 294772 | 54834509 ~ 54836517 (+) |
| XLOC_025769 | NA | non-coding | upstream | 794650 | 54332726 ~ 54336639 (+) |
| XLOC_025768 | NA | non-coding | upstream | 827665 | 54289678 ~ 54303624 (+) |
| XLOC_025767 | NA | non-coding | upstream | 847104 | 54283767 ~ 54284185 (+) |
| XLOC_025766 | NA | non-coding | upstream | 859944 | 54270703 ~ 54271345 (+) |
| XLOC_025791 | FP326652.1 | non-coding | downstream | 967204 | 56099256 ~ 56107909 (+) |
