Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110531088 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 37930118 ~ 37931963 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002474628.2 | True | 1566 | mRNA | 0.45 | 3 | 37930118 | 37931963 |
37,927,200
37,927,600
37,928,000
37,928,400
37,928,800
37,929,200
37,929,600
37,930,000
37,930,400
37,930,800
37,931,200
37,931,200
37,931,600
37,932,000
37,932,400
37,932,800
37,933,200
37,933,600
37,934,000
37,934,400
37,934,800
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530911 | parp1 | coding | downstream | 8707 | 37905170 ~ 37921411 (-) |
| LOC110530910 | LOC106571760 | coding | downstream | 50240 | 37859257 ~ 37879878 (-) |
| acbd3 | LOC106571761 | coding | downstream | 78274 | 37817872 ~ 37851844 (-) |
| sod2 | sod2 | coding | downstream | 137390 | 37782174 ~ 37792728 (-) |
| LOC110530908 | otof | coding | downstream | 303158 | 37474229 ~ 37626960 (-) |
| LOC110529892 | LOC106571758 | coding | upstream | 283882 | 38215845 ~ 38260820 (-) |
| LOC100136309 | LOC100136309 | coding | upstream | 352940 | 38284903 ~ 38302289 (-) |
| LOC110529893 | LOC106571757 | coding | upstream | 398730 | 38330693 ~ 38387308 (-) |
| trnal-uaa-3 | NA | coding | upstream | 508235 | 38440198 ~ 38440280 (-) |
| LOC110530913 | NA | coding | upstream | 855550 | 38787513 ~ 38801952 (-) |
| G704129 | NA | non-coding | downstream | 13617 | 37916028 ~ 37916501 (-) |
| G704114 | NA | non-coding | downstream | 26681 | 37903220 ~ 37903437 (-) |
| G704105 | NA | non-coding | downstream | 31848 | 37897674 ~ 37898270 (-) |
| G704094 | NA | non-coding | downstream | 40905 | 37888902 ~ 37889213 (-) |
| G704072 | NA | non-coding | downstream | 115913 | 37813997 ~ 37814205 (-) |
| G704154 | NA | non-coding | upstream | 2789 | 37934752 ~ 37935205 (-) |
| G704689 | NA | non-coding | upstream | 91569 | 38023532 ~ 38023778 (-) |
| G704696 | NA | non-coding | upstream | 97636 | 38029599 ~ 38029849 (-) |
| G704697 | NA | non-coding | upstream | 98056 | 38030019 ~ 38030248 (-) |
| G704701 | NA | non-coding | upstream | 104394 | 38036357 ~ 38036719 (-) |
| LOC110529880 | LOC106571768 | other | downstream | 568525 | 37355096 ~ 37361922 (-) |
| G701618 | LOC106571560 | other | downstream | 2011943 | 35900623 ~ 35918175 (-) |
| LOC110529865 | LOC106571568 | other | downstream | 2224805 | 35633473 ~ 35705333 (-) |
| G701454 | NA | other | downstream | 2340241 | 35582998 ~ 35589877 (-) |
| G704702 | NA | other | upstream | 105762 | 38037725 ~ 38038346 (-) |
| G704874 | NA | other | upstream | 381526 | 38313489 ~ 38313803 (-) |
| G706683 | stxbp5 | other | upstream | 1287681 | 39219644 ~ 39226313 (-) |
| slc22a16 | LOC106571810 | other | upstream | 2024998 | 39956961 ~ 40017167 (-) |
| G709272 | NA | other | upstream | 4787808 | 42719771 ~ 42720699 (-) |
