Gene
RNA
| Item | Value |
|---|---|
| gene id | trnal-uaa-3 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 38440198 ~ 38440280 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnal-uaa-3 | True | 83 | mRNA | 0.53 | 1 | 38440198 | 38440280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529893 | LOC106571757 | coding | downstream | 52890 | 38330693 ~ 38387308 (-) |
| LOC100136309 | LOC100136309 | coding | downstream | 137909 | 38284903 ~ 38302289 (-) |
| LOC110529892 | LOC106571758 | coding | downstream | 179378 | 38215845 ~ 38260820 (-) |
| LOC110531088 | NA | coding | downstream | 508235 | 37930118 ~ 37931963 (-) |
| LOC110530911 | parp1 | coding | downstream | 518787 | 37905170 ~ 37921411 (-) |
| LOC110530913 | NA | coding | upstream | 347233 | 38787513 ~ 38801952 (-) |
| LOC118965515 | NA | coding | upstream | 381862 | 38822129 ~ 38826089 (-) |
| LOC110531091 | NA | coding | upstream | 610469 | 39050749 ~ 39053399 (-) |
| slc22a16 | LOC106571810 | coding | upstream | 1519089 | 39956961 ~ 40017167 (-) |
| LOC110530919 | cdc40 | coding | upstream | 1691911 | 40132191 ~ 40164976 (-) |
| G704877 | NA | non-coding | downstream | 124183 | 38315706 ~ 38316015 (-) |
| G704862 | NA | non-coding | downstream | 144137 | 38295787 ~ 38296061 (-) |
| G704855 | NA | non-coding | downstream | 159189 | 38280711 ~ 38281009 (-) |
| G704800 | NA | non-coding | downstream | 160663 | 38192006 ~ 38279535 (-) |
| G705135 | NA | non-coding | upstream | 217089 | 38657369 ~ 38657680 (-) |
| G705145 | NA | non-coding | upstream | 225210 | 38665490 ~ 38665706 (-) |
| G705254 | NA | non-coding | upstream | 301062 | 38741342 ~ 38741544 (-) |
| G705261 | NA | non-coding | upstream | 305596 | 38745876 ~ 38746078 (-) |
| G705266 | NA | non-coding | upstream | 308734 | 38749014 ~ 38749394 (-) |
| G704874 | NA | other | downstream | 126395 | 38313489 ~ 38313803 (-) |
| G704702 | NA | other | downstream | 401852 | 38037725 ~ 38038346 (-) |
| LOC110530908 | otof | other | downstream | 948041 | 37474229 ~ 37626960 (-) |
| LOC110529880 | LOC106571768 | other | downstream | 1078605 | 37355096 ~ 37361922 (-) |
| G701618 | LOC106571560 | other | downstream | 2522023 | 35900623 ~ 35918175 (-) |
| G706683 | stxbp5 | other | upstream | 779364 | 39219644 ~ 39226313 (-) |
| G709272 | NA | other | upstream | 4279491 | 42719771 ~ 42720699 (-) |
| G709454 | NA | other | upstream | 4730480 | 43170760 ~ 43171082 (-) |
| G711133 | NA | other | upstream | 6098513 | 44538793 ~ 44539504 (-) |
