LOC118965514



Basic Information


Item Value
gene id LOC118965514
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 38463535 ~ 38467848 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036985450.1
ggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaatacatttgaatttaaatttaatttaattgaactGATGGACAACTGCACCCGGACACAGCCAGGACACACCAGGAGgtcagggagtgtgtgtgcgtgtgtgtgtgctgcagctGTCAGCCCCTGACGGGCCCCTGCTGGAAaacaagctggaggccctggggcAGAGCTGTAGGGCCATGCACAGAAAGGTCCTGGACAGACAGCACAGGTAACCATGGAGATGAACACCATGGAAACTAAGCATAGTCGCAATAGAAATAGGACAGCTTGTTAGGAGTGATTAGATGGGCATTTTGGGCCCCAAAAATAGTTTACATTGGAAAAGTTTAGAAATTGGATTATGTTTATATGAGCAGGATAAACTCGTCCAGATATCTATCGAAATGTATGAATATTTGCTGCATCAATGTACTAAGTGGTAATGATATCAGCATGACAGATCAGCATACAAATGTAATATAAATGTTAGGATTTGGCCTACACACGGCAGCTGTAGGGAAATTGAGatcttaatgtgtgtgtgtctgcttgtgcGGCTTgcgcctgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggctgacTGGAAGTGACCCTGCCCTATTAGAGCTGGTGAGGCGTAGTGGAGACCTTTCTCTGTGGCTGGAGCAGGCTGAATATGCTGTGAGCTCTCTGCCTGTCACTGCCAGCAACCTCAAAGAACTTAAGACTATGGCTGAAGAGATGGACGCCCAGAATGGCCCCCAGATTCTGGCCAATCATAGAGTGAGTCATCAGGAGAGAGACTAGCACTTGAGCAAACTCAGGACCATCAATCTCAACTGGAACAAGGTGATTCATGAGTTGTTAGATAAAgtaggggaggtggaggggaaccTCCAGAGTCATGGTCAGTTCCAGGACAAGATTAACAGAATGACCGACTGCATCCAGGTCACACATCAGACCCTCAGTGGGAGAGAGGTCAGCCCTACAGAGAGCCAGAAGTACAGATGGCCAGTCTGATGACTGAGGACCCTCACCACCACCCCCTGCAGTCCAGAGCTGGTGGCCCCCATAGACCTGAACAAGACAGCCACagagctggctgactggctgctgcTCATCACCCAGATGCTTAAGTCCAACATCGTCACTGTAGGGGACACAGACGAGATACGCACTACCATGGGGTGCTTGCATGTGACGGAGAGTGACCTGGAGCTGCGTCCTCCCCAGCTGGAGAACATCGTCACTCTAGCCCAGAACATCAAGAACAAGACCTCCAACTTGAATACCTCCGTCACGGAGAAACtggagAAAGGGCATAGCCAATGGGACAACACTCAGCAAGGTGTGGAGGCGCAGCTCCAGCAGCTGGATAACATGATTGGCCACAGCGATCagtgggagaaacagagacaggaactgAATGCTCTGATTGGGGCACCTGCACACCTGAACGAGGGGCACCTGCACAACCTTCACCTCTCCAGGGAACCCCTGACCATACAGCTCAGTGACAACAAGGTGTTCTTGCAAGACCTTGGAAGAGGTCAGGGTACCATGGCAACCTGTAACGAGTGGTCCAATCAGCTCCTGCGAGAGTATTCTGCTGACGACACAAGGAGGATCAAAGATGTCACAGAGAAAAACAACGTGGAGCCTGGAACAGCATCAACAAGAAGTGGACgtacacatgcagacacacacacacacgtatacacacacacttgtcaAGTCTCACCTAATGTCCTGAACCAACTTGAATTCTTGACTCCGCTATTTCATTCAACAATGGACCTCCAACCAAACCAATGCTTGATCATTTGTCATTCCATCGATCATTGATTGTCATGTTGATGTTGATTGATTGACAGAGCTAGTGttgtggggttgtgtgtgtgttttaaaagtTGTAAGGTGACAGAAAATAAAGGGAACTGGGATGTAGCGGTATATGGTTTAAATGAGGGGCTGAAACACAGAGGTTTCATCTGTTCACAGATtcaatactatagaccactacagaAATGTGATTTCATTCAGCTACCATTGAGTTGTGCTTTTTCATTGGGTTTTTCTAGGTTAGTCTCTCTTGAAGGAGCATTGATGCTCTAAAAACAGACTGGTCATACATGTTCTCCTACGTGggctctttctccatctctgtttTCCACCAATAGGAAGCCCACGTCGTTGTCGTTTCAAATGGAGTTTTTTCTGGGAATtgctttttttctccattttacCCTCTTTCCCTTCTTATCATCTCTCCCCGTTCTCCTCCTTCCAGTGGTGTGAAGTAAatgctttaaagtactacttaagttattttttggggtatctgtagtttactatttatattttggataacttttactttttactccatacattttccatgacacccaaaagtactcgttacattttgaatgctatgCAGGACAGAAATGGTCcgattcacacacttatcaagagaacatccctggtcctctctactgccactgatctggcagactcactaaacataaaCACTTTGTTTCtgaaatgtctgagtgttggagtgtcacCCTGGCTCTCCGTAAA

Function


NR:

description
PREDICTED: utrophin-like isoform X8

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036985450.1 True 2635 mRNA 0.47 7 38463535 38467848

Neighbor


gene id symbol gene type direction distance location
LOC110529891 LOC106571759 coding upstream 324450 38093831 ~ 38139085 (+)
LOC110529887 wtap coding upstream 662500 37793008 ~ 37801035 (+)
LOC118965681 NA coding upstream 663860 37799541 ~ 37799675 (+)
LOC110530909 LOC106571774 coding upstream 729936 37652125 ~ 37733599 (+)
drc1 drc1 coding upstream 989410 37462007 ~ 37474125 (+)
LOC110530912 LOC106571754 coding downstream 4345 38472193 ~ 38641598 (+)
grm1a LOC106607995 coding downstream 372148 38839996 ~ 38896580 (+)
LOC110529894 LOC106571778 coding downstream 428999 38896847 ~ 38923455 (+)
adgb adgb coding downstream 461608 38929456 ~ 39047229 (+)
stxbp5a stxbp5 coding downstream 602617 39070465 ~ 39235478 (+)
G704380 NA non-coding upstream 170444 38292807 ~ 38293091 (+)
G704373 NA non-coding upstream 182337 38280988 ~ 38281198 (+)
G704223 NA non-coding upstream 411749 38048471 ~ 38051786 (+)
G704217 NA non-coding upstream 432231 38030965 ~ 38031304 (+)
G705134 NA non-coding downstream 189534 38657382 ~ 38657646 (+)
G705136 NA non-coding downstream 190907 38658755 ~ 38658979 (+)
G705253 NA non-coding downstream 272993 38740841 ~ 38741109 (+)
G705255 NA non-coding downstream 274607 38742455 ~ 38742748 (+)
G705323 NA non-coding downstream 318700 38786548 ~ 38786785 (+)
G704281 NA other upstream 233561 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 691900 37770864 ~ 37771635 (+)
G702817 LOC106571770 other upstream 1213726 37248737 ~ 37249809 (+)
G702687 NA other upstream 1404312 37058345 ~ 37059223 (+)
G702415 NA other upstream 1762796 36700438 ~ 36700739 (+)
G705273 LOC100136012 other downstream 288023 38755871 ~ 38756305 (+)
G705853 NA other downstream 935100 39402948 ~ 39403296 (+)
G706274 NA other downstream 1630058 40097906 ~ 40102291 (+)
LOC110530920 LOC106571806 other downstream 1698360 40166174 ~ 40323818 (+)

Expression



Co-expression Network