Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965515 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 38822129 ~ 38826089 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: F-box only protein 30-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052874.1 | False | 772 | mRNA | 0.45 | 2 | 38822142 | 38824045 |
| TU802383 | False | 1018 | lncRNA | 0.42 | 1 | 38822129 | 38823146 |
| TU802384 | False | 445 | lncRNA | 0.40 | 1 | 38822790 | 38823234 |
| TU802385 | True | 1786 | lncRNA | 0.54 | 2 | 38823799 | 38826089 |
38,818,000
38,819,000
38,820,000
38,821,000
38,822,000
38,823,000
38,824,000
38,825,000
38,826,000
38,827,000
38,828,000
38,829,000
38,830,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530913 | NA | coding | downstream | 20190 | 38787513 ~ 38801952 (-) |
| trnal-uaa-3 | NA | coding | downstream | 381862 | 38440198 ~ 38440280 (-) |
| LOC110529893 | LOC106571757 | coding | downstream | 434834 | 38330693 ~ 38387308 (-) |
| LOC100136309 | LOC100136309 | coding | downstream | 519853 | 38284903 ~ 38302289 (-) |
| LOC110529892 | LOC106571758 | coding | downstream | 561322 | 38215845 ~ 38260820 (-) |
| LOC110531091 | NA | coding | upstream | 226704 | 39050749 ~ 39053399 (-) |
| slc22a16 | LOC106571810 | coding | upstream | 1135324 | 39956961 ~ 40017167 (-) |
| LOC110530919 | cdc40 | coding | upstream | 1308146 | 40132191 ~ 40164976 (-) |
| LOC118965516 | LOC106588149 | coding | upstream | 1319866 | 40143911 ~ 40145193 (-) |
| armc2 | armc2 | coding | upstream | 1814226 | 40638271 ~ 40669501 (-) |
| G705292 | NA | non-coding | downstream | 54753 | 38764581 ~ 38767389 (-) |
| G705271 | NA | non-coding | downstream | 68002 | 38753922 ~ 38754140 (-) |
| G705266 | NA | non-coding | downstream | 72748 | 38749014 ~ 38749394 (-) |
| G705261 | NA | non-coding | downstream | 76064 | 38745876 ~ 38746078 (-) |
| G705254 | NA | non-coding | downstream | 80598 | 38741342 ~ 38741544 (-) |
| G706700 | NA | non-coding | upstream | 416818 | 39240863 ~ 39241112 (-) |
| G706703 | NA | non-coding | upstream | 421021 | 39245066 ~ 39245432 (-) |
| G706797 | NA | non-coding | upstream | 565237 | 39389282 ~ 39389528 (-) |
| G706800 | NA | non-coding | upstream | 572765 | 39396810 ~ 39397157 (-) |
| G706816 | NA | non-coding | upstream | 604104 | 39428149 ~ 39428369 (-) |
| G704874 | NA | other | downstream | 508339 | 38313489 ~ 38313803 (-) |
| G704702 | NA | other | downstream | 783796 | 38037725 ~ 38038346 (-) |
| LOC110530908 | otof | other | downstream | 1329985 | 37474229 ~ 37626960 (-) |
| LOC110529880 | LOC106571768 | other | downstream | 1460549 | 37355096 ~ 37361922 (-) |
| G701618 | LOC106571560 | other | downstream | 2903967 | 35900623 ~ 35918175 (-) |
| G706683 | stxbp5 | other | upstream | 395599 | 39219644 ~ 39226313 (-) |
| G709272 | NA | other | upstream | 3895726 | 42719771 ~ 42720699 (-) |
| G709454 | NA | other | upstream | 4346715 | 43170760 ~ 43171082 (-) |
| G711133 | NA | other | upstream | 5714748 | 44538793 ~ 44539504 (-) |
