usta (ust)


Basic Information

Item Value
gene id usta
gene name ust
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39800464 ~ 39953509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612555.2
GTTGCTGTACACACAGTGACGCTGTTTTACACCTACACTCACTGCAAATAAACCTTATGTGCTGAACATTTTTTCCACGTTCAGTAATCTGACACCGCTGCTGGCCCGAAAAGTTTCAGCCGAAGGATGGACTCGCAACTTTCCTTTGCAGTAACAGTCCGGCGAGAACAGACGAGAGGGACCGAACCGGAGGCGAAAACCGTGCGCGAAAAAAAAATAACCCGTGGTGGCACCGGGTGCCTGAAGTTTCTGAATTAGGTGTCCGTTTGAAATTATATCAAAGCAAGAAGTTTCACGTTGCACAGGTGGATGGGTGACTACCGGTCTCGGCGGCGCTTTGTGAGGAGGAGATTATGAAGAATTTCAGCAACAGTCCCCTTCACAACAACCAGACTTCAAACCACGTTAGAGATCGGAAAAACAAAAAAATCGGCTTTCTCTCAGCGGTTCCGTTGCGTGTTCCCCTGAGAGGTTATGGTTTCTGTATGGCTACTCTTTTTCTCTTCTGTTTTGGGTCTCTGTTTTACCAGTTGAATGGAGGACCCCCCGAAATTCTGCTGGACATCCGACAGTATCTCGGAGAGTCCACGTATCTCGATGACCACGGACCCCCAGCTCCCAGGGTCCTGCCATTCCCCAGTCAGGTGGTGTATAACCGCGTGGGGAAGTGTGGCAGCAGGACAGTGGTCATCCTACTGAGGTTGCTGGCAGAGAGACATCAGTTCAACCTTGTCTCCTCAGACATCCACAACAAGACACGCCTCACCAAACATGAACAGGTGGATCTTATGAGGAACATCAGCAACATCCCTGAGCCCTTCCTGTACACCAGACATGTCCACTTCCTCAACTTCACCAGgtTCAGGATAGAGCAGCCCGTCTACATCAACATCATACGGGACCCCATTAACCGTTTCCTCTCCAACTACTTCTTCCGACGTTTCGGGGACTGGAGGGGAGAGCAGAACCACCTCATCCGAACACCAGGGATGAAGGATGACGAGAGATACCTGgaTATCAATGTCTGCATCCTGGAGAATTACCCAGAATGTTCCAACCCCAGACTCTTCTACATCATCCCTTATTTCTGTGGACAGCACCCACAGTGCAGAGAGCCGGGAGTATGGGCTCTGGAAAGGGCCAAACAGAACGTTCTAGAAAACTTTCTTATTGTGGGGATCCTAGAGGAGCTGGAAGATGTCCTGCTCCTTCTCGAGAGACTGTTGCCTCACTACTTTACTGACGTACTCAACATTTACAAGAGCCCAGACTACATGAAGATGGGGAACATGACTGGCACGGTGCGtaaacacacacccactctgGAAGCTCTTCAGGTGTTATACCACCGTATGCGCTACGAGTACGACTTCTACAACTTCATCCGAGAGCAGTTCCACCTGATGAAGAAGAAGATTGGCCTCAAGTCGGTCTCCCGACCCACTGCCCACCAGGCCTCCTTCCTAAGAGAGCTGGCCGTCCGAACCCCAGAGCCCCTTGACGAAGATGAGGAGTTGGAGACCGACCTCGAGGACGCCAACAGCTGGTTCGTCCAGCCCTGACAGGTCCCGTGGCGACTGAAGACTTTACCAGCAGCTGGTTGGCTGGAGGTGGCATGAGAAGGGGGCGGGGAATACGCCCTGTCTGTCAGCATTCCCAGGAGGACGATTGGTTGGGGGTGTGTGGATCCTGATGCCCGTGTTTTTACGGGCTCCATTTTCCGTTTGGCtcggatggatagatggatggatggatgggcggatggatggatggatggatggatggactaaCTGCCATATTTAAAGATTGAAGATTGAAGATTAATGGAATCTTTAAAAATGTAACTTTGGTTGTTTTAAGGTTTGATTTGACTTGGTTTAGCTCAAATGTGACAGTGTCTATGGATAACAGAATCAGTTTACTTTGCTTAACAGATGTTGAAATGATACAAGACGGTCAAATGGCAAGAAGAGCACCCAACTATGAATTCAGAGAATTCCAAACGTGTGCCTATGATTGGATTAGACATTTATCCAACAATATATGAAGATGGGTTGAATATTTTGGGACATAACTAGGGAAATATTGAGGAAATATTATGTTCATTGGTGAAAATGTATGTTTGTCCTCAATTGTCAATGTTTTCATAAGACAGAGCATTAATGTTTGACATCctacaacaacaataaacactcaaagaaaaatattttattaaaaagATAGAGCTGAAGGATGAAACATTTTAATCCAAAGCTTTACCTGAACTCACCAAATGATATTACCATTTGTTAAGTCTTAACTCACTGCACTTAATCTTATTTTGATGTTGTTCAACTTCAGATGTCTACTTTGTTTTCTCTGTTTCCaaactctctcctgactctcagTTCTACAGTATTTCATAGTGCAGCCATGGTGTTACACTTTGGTCATTTTAGGTAACTCAACATCCAGAGAATAAATGGCCACAACAACAAGCGATTACCTAGCATTAGTACCTACAGTATGAAGTACAACATGCCAATCTAATATACAGATTGTGGTAAGGCCTATGTAGTCATTGTCATTGTCTTCCGTGTGGATTTTGTTATTGACAgtttaatttattattattattattattattatgtattcaTTTGCATTCCAGATAAGATTCTCAGGAAAAAAAAGGTTTCTTACAAAGTTGAAATCATTTGTACGTTTAGGATTCTTACAACTATCTAGTTATTCATACTATCTAAAGATGAGTCAAAGGTCCAAAATAAAATATGATCAGCTTCAAGAAATGGCGAAACTGTTTTACAATGAATGGAATCCATGAATTTCAATATCCTCAGAGTTTTCAAAATAAAAACCTAACAATTGCA
>TU803109
TTGAAGATTAATGGAATCTTTAAAAATGTAACTTTGGTTGTTTTAAGGTTTGATTTGACTTGGTTTAGCTCAAATGTGACAGTGTCTATGGATAACAGAATCAGTTTACTTTGCTTAACAGATGTTGAAATGATACAAGACGGTCAAATGGCAAGAAGAGCACCCAACTATGAATTCAGAGAATTCCAAACGTGTGCCTATGATTGGATTAGACATTTATCCAACAATATATGAAGATGGGTTGAATATTTTGGGACATAACTAGGGAAATATTGAGGAAATATTATGTTCATTGGTGAAAATGTATGTTTGTCCTCAATTGTCAATGTTTTCATAAGACAGAGCATTAATGTTTGACATCctacaacaacaataaacactcaaagaaaaatattttattaaaaagATAGAGCTGAAGGATGAAACATTTTAATCCAAAGCTTTACCTGAACTCACCAAATGATATTACCATTTGTTAAGTCTTAACTCACTGCACTTAATCTTATTTTGATGTTGTTCAACTTCAGATGTCTACTTTGTTTTCTCTGTTTCCaaactctctcctgactctcagTTCTACAGTATTTCATAGTGCAGCCATGGTGTTACACTTTGGTCATTTTAGGTAACTCAACATCCAGAGAATAAATGGCCACAACAACAAGCGATTACCTAGCATTAGTACCTACAGTATGAAGTACAACATGCCAATCTAATATACAGATTGTGGTAAGGCCTATGTAGTCATTGTCATTGTCTTCCGTGTGGATTTTGTTATTGACAgtttaatttattattattattattattattatgtattcaTTTGCATTCCAGATAAGATTCTCAGGAAAAAAAAGGATTCTTACAACTATCTAGTTATTCATACTATCTAAAGATGAGTCAAAGGTCCAAAATAAAATATGATCAGCTTCAAGAAATGGCGAAACTGTTTTACAATGAATGGAATCCATGAATTTCAATATCCTCAGAGTTTTCAAAATAAAAACCTAACAATTGCA

Function

symbol description
ust Predicted to enable sulfotransferase activity. Predicted to be involved in dermatan sulfate biosynthetic process and protein sulfation. Predicted to act upstream of or within establishment of cell polarity and regulation of axonogenesis. Predicted to be located in Golgi membrane.

NR:

description
PREDICTED: uronyl 2-sulfotransferase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612555.2 False 2867 mRNA 0.44 8 39800464 39953509
TU803109 True 1019 lncRNA 0.32 2 39952456 39953509

Neighbor

gene id symbol gene type direction distance location
LOC110529898 sash1 coding upstream 4245 39463325 ~ 39796219 (+)
LOC110530918 samd5 coding upstream 539955 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 560610 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 564986 39070465 ~ 39235478 (+)
adgb adgb coding upstream 753235 38929456 ~ 39047229 (+)
LOC110529903 LOC106571809 coding downstream 80423 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 212665 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 467790 40421299 ~ 40424106 (+)
cd164 LOC106571804 coding downstream 544531 40498040 ~ 40516785 (+)
LOC110529910 LOC106571802 coding downstream 679719 40633228 ~ 40639520 (+)
G706108 NA non-coding upstream 47697 39752246 ~ 39752767 (+)
G706039 NA non-coding upstream 173948 39626314 ~ 39626516 (+)
G706035 NA non-coding upstream 177389 39622842 ~ 39623075 (+)
G706024 NA non-coding upstream 192056 39608178 ~ 39608408 (+)
G706023 NA non-coding upstream 192595 39607657 ~ 39607869 (+)
G706217 NA non-coding downstream 69056 40022565 ~ 40022772 (+)
G706220 NA non-coding downstream 72722 40026231 ~ 40026492 (+)
G706227 NA non-coding downstream 78425 40031934 ~ 40032216 (+)
G706441 NA non-coding downstream 383199 40336708 ~ 40336919 (+)
G706443 NA non-coding downstream 389384 40342893 ~ 40343101 (+)
G705853 NA other upstream 397168 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 1044159 38755871 ~ 38756305 (+)
G704281 NA other upstream 1570490 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 2028829 37770864 ~ 37771635 (+)
G706274 NA other downstream 144397 40097906 ~ 40102291 (+)
G708034 NA other downstream 1133189 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1327329 41160943 ~ 41283719 (+)
G708448 NA other downstream 1426516 41380025 ~ 41384183 (+)
G706156 NA non-coding upstream 40413 39911563 ~ 39912043 (+)
G706154 NA non-coding upstream 49451 39902845 ~ 39903005 (+)
G706150 NA non-coding upstream 63014 39889194 ~ 39889442 (+)
G706123 NA non-coding upstream 113002 39838212 ~ 39839454 (+)

Expression


Co-expression Network