Item | Value |
---|---|
gene id | armc2 |
gene name | armc2 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 40638271 ~ 40669501 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
armc2 | Predicted to be involved in sperm axoneme assembly. Human ortholog(s) of this gene implicated in spermatogenic failure 38. Orthologous to human ARMC2 (armadillo repeat containing 2). |
description |
---|
armadillo repeat-containing protein 2 |
id | description |
---|---|
K24123 | ARMC2; armadillo repeat-containing protein 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021612562.2 | False | 5212 | mRNA | 0.48 | 18 | 40638271 | 40668799 |
XM_036985472.1 | False | 5191 | mRNA | 0.48 | 18 | 40638271 | 40668799 |
XM_036985471.1 | True | 5747 | mRNA | 0.47 | 18 | 40638271 | 40669501 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530919 | cdc40 | coding | downstream | 473295 | 40132191 ~ 40164976 (-) |
LOC118965516 | LOC106588149 | coding | downstream | 493078 | 40143911 ~ 40145193 (-) |
slc22a16 | LOC106571810 | coding | downstream | 621104 | 39956961 ~ 40017167 (-) |
LOC110531091 | NA | coding | downstream | 1584872 | 39050749 ~ 39053399 (-) |
LOC118965515 | NA | coding | downstream | 1814226 | 38822129 ~ 38826089 (-) |
LOC110529912 | LOC106571799 | coding | upstream | 54896 | 40724397 ~ 40779631 (-) |
LOC118965517 | NA | coding | upstream | 110350 | 40779851 ~ 40800037 (-) |
LOC110529916 | LOC106571797 | coding | upstream | 288641 | 40958142 ~ 40969478 (-) |
LOC118965611 | NA | coding | upstream | 1056020 | 41725469 ~ 41728987 (-) |
klhl18 | klhl18 | coding | upstream | 1671181 | 42340682 ~ 42420087 (-) |
G707801 | NA | non-coding | downstream | 2204 | 40635454 ~ 40636067 (-) |
G707520 | NA | non-coding | downstream | 115750 | 40522284 ~ 40522521 (-) |
G707485 | NA | non-coding | downstream | 121520 | 40512114 ~ 40516751 (-) |
G707505 | NA | non-coding | downstream | 138781 | 40498050 ~ 40499490 (-) |
G707497 | LOC106613263 | non-coding | downstream | 152891 | 40485050 ~ 40485380 (-) |
G707843 | NA | non-coding | upstream | 27887 | 40697388 ~ 40697588 (-) |
G707847 | NA | non-coding | upstream | 34709 | 40704210 ~ 40704727 (-) |
G707849 | NA | non-coding | upstream | 38541 | 40708042 ~ 40708401 (-) |
G707817 | NA | non-coding | upstream | 46914 | 40716415 ~ 40717888 (-) |
G707884 | NA | non-coding | upstream | 143287 | 40812788 ~ 40819330 (-) |
G706683 | stxbp5 | other | downstream | 1411958 | 39219644 ~ 39226313 (-) |
G704874 | NA | other | downstream | 2324468 | 38313489 ~ 38313803 (-) |
G704702 | NA | other | downstream | 2599925 | 38037725 ~ 38038346 (-) |
LOC110530908 | otof | other | downstream | 3146114 | 37474229 ~ 37626960 (-) |
G709272 | NA | other | upstream | 2050270 | 42719771 ~ 42720699 (-) |
G709454 | NA | other | upstream | 2501259 | 43170760 ~ 43171082 (-) |
G711133 | NA | other | upstream | 3869292 | 44538793 ~ 44539504 (-) |
G712814 | NA | other | upstream | 4788276 | 45457777 ~ 45458248 (-) |
crfb16 | LOC106568648 | other | upstream | 5641629 | 46309732 ~ 46325685 (-) |