XLOC_025789


Basic Information

Item Value
gene id XLOC_025789
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 55482120 ~ 55488241 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052806
ACAACAGAAGAAGAAGGAGAACAAAAAGTCGCTGCTGGCTGCTCGTCCTCCCTCACACCACAAAGCTTGCTTCATTGAGCTGTGGATCGCGGAGTCTCTGTATTGGAAGGATCTCGCCGATTTCCAGCGAAACTGTTTCTCTTATTTGTTTATCTTAAAGATCGGGTGCATTTTACTTCCCGGGAAGAGCAGTTGTTtatattgtaatgcatttttgTCTCTGATCTCCTTTGGTAGTTTGAGTACTGAAAAGAATGAAGTCCACTGTGATAGACATTGTGTGCCGACTAATTTGGGTATGTTTGCATTCTCAAAAGCAGGTTTCTAATTTTTGCAAGGCTGTATTAATATCTGAACCGTTCATCCTTTTGTTTAATCTATGCACGTTGTGTGCTAATATATTGCGTTAATGAGCACGTGTTCGCAGCGTGACTGGTCTCATTCACTgaggattgaggtaaagttgattgTATATTCACactttcagactttctccttaatataattcctgaaatgtattatttctttttaggCAAATTTTGAATAACGAACTCATATTATGATTATGAAAGTAtgttgttcacagtcaaataagtAGTGTCAAAGTCGTTTTCAAGTCGttcttgcatgtgatttcagaccaaatattcaaagtaaacaATATAGGCGAGCGCATCACAAGTTCTCATTGATAATAATCATTTTCAGGGATTATATTGAGGAGAGAGTCtgagtgtgaatataaaaccaactttaccttaattaacTGAGTGTTTTTCtaagtaaattatttaatgtaGAATTTTATAACACTTAAGTGATGTTCTACCTCTCTTTTCAGGTTGTTTGCAGTTGCAGTGGACTACATCGAGATTCTATTTGGTGTTAACCAACTTGGAAACAGACCAATCAATCTAAcagggtagttcacccaaacatgaaaattgtaaattaacttttcaaatactgagtttcttctgttagaaataaaaaatatgtattttgaagaaagctggaagctTAACTATTCACTTctatagcaaataaaataaatgctatggaagtcaattattacataatttcagctttcttcaaaattcatcttgtgttcaagagaagaaattGAAACCAATTGATGTTTAGTAAATTTTTATCTACTATTCCTTAAGTGTCTTTTGATCTCAGAGTTAACTTGCTGTTATGACATTCATTGGAACAGGTTGAGGTTTGTAGTTTTTACACTGTGCTGTTAACTTTAATGCTTAGTGGTTAATttaattgcattgtttttttgttacTTTGTCATTGTATCTGAACAATTCTGTTTGTCTTGCTGTATGTAATAAAGAAAATTGAGCACTATATTTGTGAATGGTAATTATTACACTCTATAAAGCACTGTCTTTGAACCTGTGTAGCCCATCCATGGCTCAGCGGGCCAAGCAACAGTGCAACAGTAAAGGGTTGTTATAACTGGAGCCCCTTGGCTTTTCTTCCCAAGTTGCTCTTTTAAAAGCAACCTACAAATGACGTTTTCAAATTGTTAGTACAattgagaaaaaacaaacaccacAACTAGAGTTATTTTGCAAAAGCCGTTGATCAGTTTCTACACACAATCATGTTGTCTGTATGGCCAAACACAATATTAACAtgaaatattgtgcaaaagaaaTAACAATTGGTAAAGCCACTAAAAACAAACAGCGAATGGCAACATTTTAGCGTAAACAATGATACAAAATAATCACGTTAAAATCAAAGTACATCATATTTGGAGTAGAGTCCAAAACTCTGGTGGAAAAAGCAATTTATGTTTGCTGACACCTTAGTACCAGCTAAGATACAGACCTTGTCATGTATGTTGGCTATAAAACACTTCAGAATTGTCAATTCCTCCTAAACATATGATAATGGTTGAATGTCAAAACTCATTCATAGAATTGATGGCAAAGGTTACTTGCCAATGATTATTCAACAAAAACTACATGATTTAATACACCACATGATCTTGCAAACAGAAAAACAATGAAGAAACAAAGCCAACCTGGCAATGAACAACACAGATATCATCACTTGTATAAGCCAAAGATAGACGAAAATGCTTTGTACATTCAACAATCTTCTCCACTTGCGCACAACATATGAGCTCATCTGTATTGAAAATAGAATAGCACTTATTTTGAGCACTGATCTGAAAATATGATGCGAGGTCTAGCCCAGTGGTTCTCAATGGTCTTGCTTCAATACCCAGATTTTACAAATCCTggaatattttaaaatgactgtgcaaaataattttaaagacaGGTTAAGCAGGAACATCTACAATTATAGTTATTGACTGTAACCGTCAACAATGGGTCAGCGCAAGCTTTTTTGTTTTAAGAGAGTAACACCATAGAGTTCTGTGCAAAAGTCTTGATTTGTCGTTTAAGCAGTAGTATATTTATCATGTATAATTACCTCTCTATTTTTTTACTTCAACATAATTGAGATGAAGTCTATTAGacaaataaggaaaataaataaaataagccttAATCAAAAGATGAAATTGGAGAAAATCTGTTATATTTCACAATAGTGTCTGCAAAACAGTTCACATTTTGTTTAGTGCCCTGGAAGGTCACACTAAATGCTGACTTTTCCCACAAGAAGTCcttgtgtttatatataactttattttttttccatgtgtGTATTTCTTTATGTCACACTAAAGTTTAAGCtagcaaaattctgtcgtacggtgctGCGAAAGGGGGCAGGAatgaacaagatgattagacatttaaataagccagcgattggtccatatttaaaatttctgtccagagtgGACAGAATGGTTTCATGTTTGGATTGGTCTCACGCTGGCCCCGTTttcactaatacgttttagtcttaaaacagcattttagaataaaaacgatctgcgtccacactagcgtttctgaacaactctgtCTACGTCactccgctgaaaacgcacaccACGTGACCACACGCAGAATATCTTCCCAGATGGGAGCTGTGCACGTCAGACTGTtgatcaaggatctaccgctggatcttatctcactatatttgttaaacgggatatttaattcatcttattATCTATATCTAACCACATACTCTCCGACTTTGGTCCTTTGATTCTATTACTTTTCACGGGTAATGTGTTTTAGCTGAGCGCAaagagttaaaatattaataaatgtggccacggacactgattctgcacatttgactgattgcttgcatttGTTTTCCTAAACAAAATGTACGTTAtgcttttataatggccattattgaatattaaaactgatattcagcaaaagagaggctatGTTTTGTACTTTCAAGGAAAATAAAAGGAGGCATTAATGTTATAGACTCGATGACGgtcataaatatactgtatagctacacaacgcctcaacactttgggtgtctgttaagttgtcaTCAAattgaaaataggcagttccttacaTCATGctcttattttattgttaagaaagtgaaacaacgtaaaCGGTGACGTGAATGAGGTtctaaagtacactgttcccttggaagatttacccgacgtgtcctcaggagtttgttttccatatcaaacttgcttagtctgaacttacaaggagaggatgcaagactgaactgtgtgtaggctacttaatattgaggacaaagccccaatcagatagacGAATGTCTGCAGCAATGCCTCCGTtatcagatgtctccattttcccccatcaacactgagcagcagcagcagtgttttagaataaaaatggcctcttcagcctttccaaaacgctccgtttttgggacttgaaaactccggcgtagtatgaacggatggcgtaaccacagcaaaacttatgcaatttaaaactaaaacgtattagtgtaaacggggtcgCAGTCAAATTATGCGactttgcaggtcagagttcaccaagcttgaactttgcaatgcagtgaactgcgaaacttgacgcacgaacttgcgtttccagtctgacatgTTCGCATGCTTATGAATGGAAATCTATGAGGAGAAAagtctagtgtgactgcagctttatacTTTCTGCTCAGTACTTTGGAACAATCAGTGtaatattttcaacatttttagtagatttattaatgttttattgaaaCCCAAAATAcagccagcgtggatcaagctctgtgaggggcgctaaaagaGCAGGGTTAAGTTGGTTGtattttcgatattcctgacacttGATGATAGACGGCTAAACTCACACAACTCTTACTGTAAAAAGATCTatactgtgtttcctacaaaaatacaaagcaggttatgtttcccagctgtctttttctgTTTTCGCTCGATATCATGAGCACTGCTCCATTTAAAccctttttggcaaaaaaaaaagaaatcaaggttaattagttaaaattagattattttaaatgtcacctATACTGcagtgcatgaactaagctgttgaatggtcagtgtatgaggcggctaggctaagctagcttcaattttgattaaattcTAATCGGTTGCATATTAAGTTGTAAATATACCCTCGTAATGCATACTGCAGGCCTTTTTTGTCtcgctttctcagatatctcacctgtttgccaaaaatgaccaATTATATCACTGGAAATGCCTGACACTGGCACATATTGTAATAGACATGGCAGGCAGGAAAACTAGACGTAACAACTAGGTGTAACAAAGCGTAACTAGGCGTAACAACAGTAActaggagggcggggcttagcgtaGGGTCAATTGGATCCTCATTGTAATCCttacaattatgtttttttttgtttcctgcTCATATACTCTCAAAATTATTCCACATAGatgcacttttttttaattatgcgcAGAAAAAGCGAAACAGTCCACAGATTCAGTTTGGCCCTAGTCAGGATATTAGTTTGCACTCTTAATATACATGCATTCACATATGACTGTTAAATGTCCAACAATGTGAAAGCCTCCTTATGTAATGTTTACCACCAATCTTATTTTACCCATTGAGTTACCATACAATACTCTTTAATAGCCAGTAAGAAATTCCCAACAAACAGCCAACACAGTGGTTTTAATCCTGTGACATGCATTATccccttttatttaaaaatccatGTTTCGTCATCTTAACTATTCACGTTAGTAATTTAGCCAGTGAGAACAGACCTGTGACCCaccatttgagaaccactgatctatgcCCACTGCAGAGGGGCTTCTGATATCACGCATAGAAAGCTCTTGAACAGGCTTGAGAAGGGATCGCTTGGGGATGAGGGGGTTTTCGGCTGGTGTCCCCCCTCAAGCACAGTGAAATTGATCTAATTGCATAATCAGATGCCACACAGAGGGCTCAGGCAGCAGTGAATGGAAGAGGATAATTGTGGTACTGGTAGGTCTGTTGTGTCTAAGACATTATTTGTTGGTAGACGCACATGACAATCATGATAAAAATCATAAATGGATGCAAATGTCCCCTTCTGGCTTGTTGTTTCAGTTAAAATGTCTGGATGCATCTATTATTGATGCTCTGTGCACCCCAGGGATGCACAACTTCAAATAATAAACTCTGAGGTGGTTTGCAGGCACTCTGTCTCACCAAAAGTCCAGTGAGAGCCCTCGAATAATAAATCGCGTGTGGCCAGGCATCAGGATACTGCAGGAAGTTGTTTAGGTACTGCCATTCAATCCCTGGACTTTTGGTAAGTCAGCATGTATCAAACAGAGGTAGCGCGTACACTTCAACTCATGGGCCTTTCTAGGCTCTACACCGTCTTTTCACTAGTTGTTCGACATTCTTTATCTATGCATTTTAGTACATCACCAAAACCTGTTTGAGGGCCTACAGCGTGTGCCTTCATGTGGTCCCGACCAAATcaaaagcaagcaagcaagcaatatCGTCCTTTCTTTTAGTTATGAATGTGTTCAGATTTTTCACAGCTCTGTTCAATGGGCAAGGTGGCACCTGTAATTTTCAACTCTGGTTAAGTCTTGCCCtcatggtatatatatattttttttgtcatttataaagaaaCATCTCTTCACATGTCCT
>TCONS_00050663
CAAAAAGTCGCTGCTGGCTGCTCGTCCTCCCTCACACCACAAAGCTTGCTTCATTGAGCTGTGGATCGCGGAGTCTCTGTATTGGAAGGATCTCGCCGATTTCCAGCGAAACTGTTTCTCTTATTTGTTTATCTTAAAGATCGGGTGCATTTTACTTCCCGGGAAGAGCAGTTGTTtatattgtaatgcatttttgTCTCTGATCTCCTTTGGTAGTTTGAGTACTGAAAAGAATGAAGTCCACTGTGATAGACATTGTGTGCCGACTAATTTGGGTTGTTTGCAGTTGCAGTGGACTACATCGAGATTCTATTTGGTGTTAACCAACTTGGAAACAGACCAATCAATCTAAcagggtagttcacccaaacatgaaaattgtaaattaacttttcaaatactgagtttcttctgttagaaataaaaaatatgtattttgaagaaagctggaagctTAACTATTCACTTctatagcaaataaaataaatgctatggaagtcaattattacataatttcagctttcttcaaaattcatcttgtgttcaagagaagaaattGAAACCAATTGATGTTTAGTAAATTTTTATCTACTATTCCTTAAGTGTCTTTTGATCTCAGAGTTAACTTGCTGTTATGACATTCATTGGAACAGGTTGAGGTTTGTAGTTTTTACACTGTGCTGTTAACTTTAATGCTTAGTGGTTAATttaattgcattgtttttttgttacTTTGTCATTGTATCTGAACAATTCTGTTTGTCTTGCTGTATGTAATAAAGAAAATTGAGCACTATATTTGTGAATGGTAATTATTACACTCTATAAAGCACTGTCTTTGAACCTGTGTAGCCCATCCATGGCTCAGCGGGCCAAGCAACAGTGCAACAGTAAAGGGTTGTTATAACTGGAGCCCCTTGGCTTTTCTTCCCAAGTTGCTCTTTTAAAAGCAACCTACAAATGACGTTTTCAAATTGTTAGTACAattgagaaaaaacaaacaccacAACTAGAGTTATTTTGCAAAAGCCGTTGATCAGTTTCTACACACAATCATGTTGTCTGTATGGCCAAACACAATATTAACAtgaaatattgtgcaaaagaaaTAACAATTGGTAAAGCCACTAAAAACAAACAGCGAATGGCAACATTTTAGCGTAAACAATGATACAAAATAATCACGTTAAAATCAAAGTACATCATATTTGGAGTAGAGTCCAAAACTCTGGTGGAAAAAGCAATTTATGTTTGCTGACACCTTAGTACCAGCTAAGATACAGACCTTGTCATGTATGTTGGCTATAAAACACTTCAGAATTGTCAATTCCTCCTAAACATATGATAATGGTTGAATGTCAAAACTCATTCATAGAATTGATGGCAAAGGTTACTTGCCAATGATTATTCAACAAAAACTACATGATTTAATACACCACATGATCTTGCAAACAGAAAAACAATGAAGAAACAAAGCCAACCTGGCAATGAACAACACAGATATCATCACTTGTATAAGCCAAAGATAGACGAAAATGCTTTGTACATTCAACAATCTTCTCCACTTGCGCACAACATATGAGCTCATCTGTATTGAAAATAGAATAGCACTTATTTTGAGCACTGATCTGAAAATATGATGCGAGGTCTAGCCCAGTGGTTCTCAATGGTCTTGCTTCAATACCCAGATTTTACAAATCCTggaatattttaaaatgactgtgcaaaataattttaaagacaGGTTAAGCAGGAACATCTACAATTATAGTTATTGACTGTAACCGTCAACAATGGGTCAGCGCAAGCTTTTTTGTTTTAAGAGAGTAACACCATAGAGTTCTGTGCAAAAGTCTTGATTTGTCGTTTAAGCAGTAGTATATTTATCATGTATAATTACCTCTCTATTTTTTTACTTCAACATAATTGAGATGAAGTCTATTAGacaaataaggaaaataaataaaataagccttAATCAAAAGATGAAATTGGAGAAAATCTGTTATATTTCACAATAGTGTCTGCAAAACAGTTCACATTTTGTTTAGTGCCCTGGAAGGTCACACTAAATGCTGACTTTTCCCACAAGAAGTCcttgtgtttatatataactttattttttttccatgtgtGTATTTCTTTATGTCACACTAAAGTTTAAGCtagcaaaattctgtcgtacggtgctGCGAAAGGGGGCAGGAatgaacaagatgattagacatttaaataagccagcgattggtccatatttaaaatttctgtccagagtgGACAGAATGGTTTCATGTTTGGATTGGTCTCACGCTGGCCCCGTTttcactaatacgttttagtcttaaaacagcattttagaataaaaacgatctgcgtccacactagcgtttctgaacaactctgtCTACGTCactccgctgaaaacgcacaccACGTGACCACACGCAGAATATCTTCCCAGATGGGAGCTGTGCACGTCAGACTGTtgatcaaggatctaccgctggatcttatctcactatatttgttaaacgggatatttaattcatcttattATCTATATCTAACCACATACTCTCCGACTTTGGTCCTTTGATTCTATTACTTTTCACGGGTAATGTGTTTTAGCTGAGCGCAaagagttaaaatattaataaatgtggccacggacactgattctgcacatttgactgattgcttgcatttGTTTTCCTAAACAAAATGTACGTTAtgcttttataatggccattattgaatattaaaactgatattcagcaaaagagaggctatGTTTTGTACTTTCAAGGAAAATAAAAGGAGGCATTAATGTTATAGACTCGATGACGgtcataaatatactgtatagctacacaacgcctcaacactttgggtgtctgttaagttgtcaTCAAattgaaaataggcagttccttacaTCATGctcttattttattgttaagaaagtgaaacaacgtaaaCGGTGACGTGAATGAGGTtctaaagtacactgttcccttggaagatttacccgacgtgtcctcaggagtttgttttccatatcaaacttgcttagtctgaacttacaaggagaggatgcaagactgaactgtgtgtaggctacttaatattgaggacaaagccccaatcagatagacGAATGTCTGCAGCAATGCCTCCGTtatcagatgtctccattttcccccatcaacactgagcagcagcagcagtgttttagaataaaaatggcctcttcagcctttccaaaacgctccgtttttgggacttgaaaactccggcgtagtatgaacggatggcgtaaccacagcaaaacttatgcaatttaaaactaaaacgtattagtgtaaacggggtcgCAGTCAAATTATGCGactttgcaggtcagagttcaccaagcttgaactttgcaatgcagtgaactgcgaaacttgacgcacgaacttgcgtttccagtctgacatgTTCGCATGCTTATGAATGGAAATCTATGAGGAGAAAagtctagtgtgactgcagctttatacTTTCTGCTCAGTACTTTGGAACAATCAGTGtaatattttcaacatttttagtagatttattaatgttttattgaaaCCCAAAATAcagccagcgtggatcaagctctgtgaggggcgctaaaagaGCAGGGTTAAGTTGGTTGtattttcgatattcctgacacttGATGATAGACGGCTAAACTCACACAACTCTTACTGTAAAAAGATCTatactgtgtttcctacaaaaatacaaagcaggttatgtttcccagctgtctttttctgTTTTCGCTCGATATCATGAGCACTGCTCCATTTAAAccctttttggcaaaaaaaaaagaaatcaaggttaattagttaaaattagattattttaaatgtcacctATACTGcagtgcatgaactaagctgttgaatggtcagtgtatgaggcggctaggctaagctagcttcaattttgattaaattcTAATCGGTTGCATATTAAGTTGTAAATATACCCTCGTAATGCATACTGCAGGCCTTTTTTGTCtcgctttctcagatatctcacctgtttgccaaaaatgaccaATTATATCACTGGAAATGCCTGACACTGGCACATATTGTAATAGACATGGCAGGCAGGAAAACTAGACGTAACAACTAGGTGTAACAAAGCGTAACTAGGCGTAACAACAGTAActaggagggcggggcttagcgtaGGGTCAATTGGATCCTCATTGTAATCCttacaattatgtttttttttgtttcctgcTCATATACTCTCAAAATTATTCCACATAGatgcacttttttttaattatgcgcAGAAAAAGCGAAACAGTCCACAGATTCAGTTTGGCCCTAGTCAGGATATTAGTTTGCACTCTTAATATACATGCATTCACATATGACTGTTAAATGTCCAACAATGTGAAAGCCTCCTTATGTAATGTTTACCACCAATCTTATTTTACCCATTGAGTTACCATACAATACTCTTTAATAGCCAGTAAGAAATTCCCAACAAACAGCCAACACAGTGGTTTTAATCCTGTGACATGCATTATccccttttatttaaaaatccatGTTTCGTCATCTTAACTATTCACGTTAGTAATTTAGCCAGTGAGAACAGACCTGTGACCCaccatttgagaaccactgatctatgcCCACTGCAGAGGGGCTTCTGATATCACGCATAGAAAGCTCTTGAACAGGCTTGAGAAGGGATCGCTTGGGGATGAGGGGGTTTTCGGCTGGTGTCCCCCCTCAAGCACAGTGAAATTGATCTAATTGCATAATCAGATGCCACACAGAGGGCTCAGGCAGCAGTGAATGGAAGAGGATAATTGTGGTACTGGTAGGTCTGTTGTGTCTAAGACATTATTTGTTGGTAGACGCACATGACAATCATGATAAAAATCATAAATGGATGCAAATGTCCCCTTCTGGCTTGTTGTTTCAGTTAAAATGTCTGGATGCATCTATTATTGATGCTCTGTGCACCCCAGGGATGCACAACTTCAAATAATAAACTCTGAGGTGGTTTGCAGGCACTCTGTCTCACCAAAAGTCCAGTGAGAGCCCTCGAATAATAAATCGCGTGTGGCCAGGCATCAGGATACTGCAGGAAGTTGTTTAGGTACTGCCATTCAATCCCTGGACTTTTGGTAAGTCAGCATGTATCAAACAGAGGTAGCGCGTACACTTCAACTCATGGGCCTTTCTAGGCTCTACACCGTCTTTTCACTAGTTGTTCGACATTCTTTATCTATGCATTTTAGTACATCACCAAAACCTGTTTGAGGGCCTACAGCGTGTGCCTTCATGTGGTCCCGACCAAATcaaaagcaagcaagcaagcaatatCGTCCTTTCTTTTAGTTATGAATGTGTTCAGATTTTTCACAGCTCTGTTCAATGGGCAAGGTGGCACCTGTAATTTTCAACTCTGGTTAAGTCTTGCCCtcatggtatatatatattttttttgtcatttataaagaaaCATCTCTTCACATGTCCT
>TCONS_00052807
CACAAAGCTTGCTTCATTGAGCTGTGGATCGCGGAGTCTCTGTATTGGAAGGATCTCGCCGATTTCCAGCGAAACTGTTTCTCTTATTTGTTTATCTTAAAGATCGGGTGCATTTTACTTCCCGGGAAGAGCAGTTGTTtatattGTTGTTTGCAGTTGCAGTGGACTACATCGAGATTCTATTTGGTGTTAACCAACTTGGAAACAGACCAATCAATCTAAcagggtagttcacccaaacatgaaaattgtaaattaacttttcaaatactgagtttcttctgttagaaataaaaaatatgtattttgaagaaagctggaagctTAACTATTCACTTctatagcaaataaaataaatgctatggaagtcaattattacataatttcagctttcttcaaaattcatcttgtgttcaagagaagaaattGAAACCAATTGATGTTTAGTAAATTTTTATCTACTATTCCTTAAGTGTCTTTTGATCTCAGAGTTAACTTGCTGTTATGACATTCATTGGAACAGGTTGAGGTTTGTAGTTTTTACACTGTGCTGTTAACTTTAATGCTTAGTGGTTAATttaattgcattgtttttttgttacTTTGTCATTGTATCTGAACAATTCTGTTTGTCTTGCTGTATGTAATAAAGAAAATTGAGCACTATATTTGTGAATGGTAATTATTACACTCTATAAAGCACTGTCTTTGAACCTGTGTAGCCCATCCATGGCTCAGCGGGCCAAGCAACAGTGCAACAGTAAAGGGTTGTTATAACTGGAGCCCCTTGGCTTTTCTTCCCAAGTTGCTCTTTTAAAAGCAACCTACAAATGACGTTTTCAAATTGTTAGTACAattgagaaaaaacaaacaccacAACTAGAGTTATTTTGCAAAAGCCGTTGATCAGTTTCTACACACAATCATGTTGTCTGTATGGCCAAACACAATATTAACAtgaaatattgtgcaaaagaaaTAACAATTGGTAAAGCCACTAAAAACAAACAGCGAATGGCAACATTTTAGCGTAAACAATGATACAAAATAATCACGTTAAAATCAAAGTACATCATATTTGGAGTAGAGTCCAAAACTCTGGTGGAAAAAGCAATTTATGTTTGCTGACACCTTAGTACCAGCTAAGATACAGACCTTGTCATGTATGTTGGCTATAAAACACTTCAGAATTGTCAATTCCTCCTAAACATATGATAATGGTTGAATGTCAAAACTCATTCATAGAATTGATGGCAAAGGTTACTTGCCAATGATTATTCAACAAAAACTACATGATTTAATACACCACATGATCTTGCAAACAGAAAAACAATGAAGAAACAAAGCCAACCTGGCAATGAACAACACAGATATCATCACTTGTATAAGCCAAAGATAGACGAAAATGCTTTGTACATTCAACAATCTTCTCCACTTGCGCACAACATATGAGCTCATCTGTATTGAAAATAGAATAGCACTTATTTTGAGCACTGATCTGAAAATATGATGCGAGGTCTAGCCCAGTGGTTCTCAATGGTCTTGCTTCAATACCCAGATTTTACAAATCCTggaatattttaaaatgactgtgcaaaataattttaaagacaGGTTAAGCAGGAACATCTACAATTATAGTTATTGACTGTAACCGTCAACAATGGGTCAGCGCAAGCTTTTTTGTTTTAAGAGAGTAACACCATAGAGTTCTGTGCAAAAGTCTTGATTTGTCGTTTAAGCAGTAGTATATTTATCATGTATAATTACCTCTCTATTTTTTTACTTCAACATAATTGAGATGAAGTCTATTAGacaaataaggaaaataaataaaataagccttAATCAAAAGATGAAATTGGAGAAAATCTGTTATATTTCACAATAGTGTCTGCAAAACAGTTCACATTTTGTTTAGTGCCCTGGAAGGTCACACTAAATGCTGACTTTTCCCACAAGAAGTCcttgtgtttatatataactttattttttttccatgtgtGTATTTCTTTATGTCACACTAAAGTTTAAGCtagcaaaattctgtcgtacggtgctGCGAAAGGGGGCAGGAatgaacaagatgattagacatttaaataagccagcgattggtccatatttaaaatttctgtccagagtgGACAGAATGGTTTCATGTTTGGATTGGTCTCACGCTGGCCCCGTTttcactaatacgttttagtcttaaaacagcattttagaataaaaacgatctgcgtccacactagcgtttctgaacaactctgtCTACGTCactccgctgaaaacgcacaccACGTGACCACACGCAGAATATCTTCCCAGATGGGAGCTGTGCACGTCAGACTGTtgatcaaggatctaccgctggatcttatctcactatatttgttaaacgggatatttaattcatcttattATCTATATCTAACCACATACTCTCCGACTTTGGTCCTTTGATTCTATTACTTTTCACGGGTAATGTGTTTTAGCTGAGCGCAaagagttaaaatattaataaatgtggccacggacactgattctgcacatttgactgattgcttgcatttGTTTTCCTAAACAAAATGTACGTTAtgcttttataatggccattattgaatattaaaactgatattcagcaaaagagaggctatGTTTTGTACTTTCAAGGAAAATAAAAGGAGGCATTAATGTTATAGACTCGATGACGgtcataaatatactgtatagctacacaacgcctcaacactttgggtgtctgttaagttgtcaTCAAattgaaaataggcagttccttacaTCATGctcttattttattgttaagaaagtgaaacaacgtaaaCGGTGACGTGAATGAGGTtctaaagtacactgttcccttggaagatttacccgacgtgtcctcaggagtttgttttccatatcaaacttgcttagtctgaacttacaaggagaggatgcaagactgaactgtgtgtaggctacttaatattgaggacaaagccccaatcagatagacGAATGTCTGCAGCAATGCCTCCGTtatcagatgtctccattttcccccatcaacactgagcagcagcagcagtgttttagaataaaaatggcctcttcagcctttccaaaacgctccgtttttgggacttgaaaactccggcgtagtatgaacggatggcgtaaccacagcaaaacttatgcaatttaaaactaaaacgtattagtgtaaacggggtcgCAGTCAAATTATGCGactttgcaggtcagagttcaccaagcttgaactttgcaatgcagtgaactgcgaaacttgacgcacgaacttgcgtttccagtctgacatgTTCGCATGCTTATGAATGGAAATCTATGAGGAGAAAagtctagtgtgactgcagctttatacTTTCTGCTCAGTACTTTGGAACAATCAGTGtaatattttcaacatttttagtagatttattaatgttttattgaaaCCCAAAATAcagccagcgtggatcaagctctgtgaggggcgctaaaagaGCAGGGTTAAGTTGGTTGtattttcgatattcctgacacttGATGATAGACGGCTAAACTCACACAACTCTTACTGTAAAAAGATCTatactgtgtttcctacaaaaatacaaagcaggttatgtttcccagctgtctttttctgTTTTCGCTCGATATCATGAGCACTGCTCCATTTAAAccctttttggcaaaaaaaaaagaaatcaaggttaattagttaaaattagattattttaaatgtcacctATACTGcagtgcatgaactaagctgttgaatggtcagtgtatgaggcggctaggctaagctagcttcaattttgattaaattcTAATCGGTTGCATATTAAGTTGTAAATATACCCTCGTAATGCATACTGCAGGCCTTTTTTGTCtcgctttctcagatatctcacctgtttgccaaaaatgaccaATTATATCACTGGAAATGCCTGACACTGGCACATATTGTAATAGACATGGCAGGCAGGAAAACTAGACGTAACAACTAGGTGTAACAAAGCGTAACTAGGCGTAACAACAGTAActaggagggcggggcttagcgtaGGGTCAATTGGATCCTCATTGTAATCCttacaattatgtttttttttgtttcctgcTCATATACTCTCAAAATTATTCCACATAGatgcacttttttttaattatgcgcAGAAAAAGCGAAACAGTCCACAGATTCAGTTTGGCCCTAGTCAGGATATTAGTTTGCACTCTTAATATACATGCATTCACATATGACTGTTAAATGTCCAACAATGTGAAAGCCTCCTTATGTAATGTTTACCACCAATCTTATTTTACCCATTGAGTTACCATACAATACTCTTTAATAGCCAGTAAGAAATTCCCAACAAACAGCCAACACAGTGGTTTTAATCCTGTGACATGCATTATccccttttatttaaaaatccatGTTTCGTCATCTTAACTATTCACGTTAGTAATTTAGCCAGTGAGAACAGACCTGTGACCCaccatttgagaaccactgatctatgcCCACTGCAGAGGGGCTTCTGATATCACGCATAGAAAGCTCTTGAACAGGCTTGAGAAGGGATCGCTTGGGGATGAGGGGGTTTTCGGCTGGTGTCCCCCCTCAAGCACAGTGAAATTGATCTAATTGCATAATCAGATGCCACACAGAGGGCTCAGGCAGCAGTGAATGGAAGAGGATAATTGTGGTACTGGTAGGTCTGTTGTGTCTAAGACATTATTTGTTGGTAGACGCACATGACAATCATGATAAAAATCATAAATGGATGCAAATGTCCCCTTCTGGCTTGTTGTTTCAGTTAAAATGTCTGGATGCATCTATTATTGATGCTCTGTGCACCCCAGGGATGCACAACTTCAAATAATAAACTCTGAGGTGGTTTGCAGGCACTCTGTCTCACCAAAAGTCCAGTGAGAGCCCTCGAATAATAAATCGCGTGTGGCCAGGCATCAGGATACTGCAGGAAGTTGTTTAGGTACTGCCATTCAATCCCTGGACTTTTGGTAAGTCAGCATGTATCAAACAGAGGTAGCGCGTACACTTCAACTCATGGGCCTTTCTAGGCTCTACACCGTCTTTTCACTAGTTGTTCGACATTCTTTATCTATGCATTTTAGTACATCACCAAAACCTGTTTGAGGGCCTACAGCGTGTGCCTTCATGTGGTCCCGACCAAATcaaaagcaagcaagcaagcaatatCGTCCTTTCTTTTAGTTATGAATGTGTTCAGATTTTTCACAGCTCTGTTCAATGGGCAAGGTGGCACCTGTAATTTTCAACTCTGGTTAAGTCTTGCCCtcatggtatatatatattttttttgtcatttataaagaaaCATCTCTTCACATGTCCT
>TCONS_00050664
AAGCACTGTCTTTGAACCTGTGTAGCCCATCCATGGCTCAGCGGGCCAAGCAACAGTGCAACAGTAAAGGGTTGTTATAACTGGAGCCCCTTGGCTTTTCTTCCCAAGTTGCTCTTTTAAAAGCAACCTACAAAT

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0016070 RNA metabolic process biological_process
GO:0016072 rRNA metabolic process biological_process
GO:0001732 formation of cytoplasmic translation initiation complex biological_process
GO:0071826 ribonucleoprotein complex subunit organization biological_process
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0022618 ribonucleoprotein complex assembly biological_process
GO:0065003 protein-containing complex assembly biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0034470 ncRNA processing biological_process
GO:0006364 rRNA processing biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006396 RNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0006412 translation biological_process
GO:0006413 translational initiation biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0043933 protein-containing complex subunit organization biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0010467 gene expression biological_process
GO:0044237 cellular metabolic process biological_process
GO:0044238 primary metabolic process biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0042273 ribosomal large subunit biogenesis biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0034622 cellular protein-containing complex assembly biological_process
GO:0006807 nitrogen compound metabolic process biological_process
GO:0002181 cytoplasmic translation biological_process
GO:0002183 cytoplasmic translational initiation biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0034660 ncRNA metabolic process biological_process
GO:0046483 heterocycle metabolic process biological_process
GO:0071013 catalytic step 2 spliceosome cellular_component
GO:0030684 preribosome cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:1990904 ribonucleoprotein complex cellular_component
GO:0044428 obsolete nuclear part cellular_component
GO:0070013 intracellular organelle lumen cellular_component
GO:0005852 eukaryotic translation initiation factor 3 complex cellular_component
GO:0030532 small nuclear ribonucleoprotein complex cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005634 nucleus cellular_component
GO:0033290 eukaryotic 48S preinitiation complex cellular_component
GO:0016282 eukaryotic 43S preinitiation complex cellular_component
GO:0005685 U1 snRNP cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0097525 spliceosomal snRNP complex cellular_component
GO:0031981 nuclear lumen cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0043233 organelle lumen cellular_component
GO:0070993 translation preinitiation complex cellular_component
GO:0005730 nucleolus cellular_component
GO:0008135 translation factor activity, RNA binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0030515 snoRNA binding molecular_function
GO:0097159 organic cyclic compound binding molecular_function
GO:1901363 heterocyclic compound binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko05169 Epstein-Barr virus infection
ko05016 Huntington disease
ko03200 Viral proteins

Ensembl:

ensembl_id ENSDARG00000080685

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052806 False 6122 lncRNA 0.37 1 55482120 55488241
TCONS_00050663 False 5556 lncRNA 0.38 2 55482141 55488241
TCONS_00052807 False 5426 lncRNA 0.38 2 55482178 55488241
TCONS_00050664 True 135 snoRNA 0.47 1 55483513 55483647

Neighbor

gene id symbol gene type direction distance location
XLOC_025788 NA coding upstream 94463 55386215 ~ 55387657 (+)
XLOC_025787 CT583658.1 coding upstream 182962 55299043 ~ 55299158 (+)
XLOC_025786 si:dkey-114l24.2 coding upstream 191483 55288200 ~ 55290637 (+)
XLOC_025785 hbbe1.3 coding upstream 350068 55131289 ~ 55132052 (+)
XLOC_025784 hbbe1.2 coding upstream 358681 55122662 ~ 55123439 (+)
XLOC_025790 NA coding downstream 158632 55646873 ~ 55654264 (+)
XLOC_025791 FP326652.1 coding downstream 611015 56099256 ~ 56107909 (+)
XLOC_025792 prkcab coding downstream 675035 56163276 ~ 56342119 (+)
XLOC_025793 NA coding downstream 870441 56358682 ~ 56360650 (+)
XLOC_025794 cacng5b coding downstream 878154 56366395 ~ 56394018 (+)
XLOC_025429 BX649540.1 misc upstream 25233084 30248739 ~ 30249036 (+)
XLOC_025776 NA non-coding upstream 645603 54834509 ~ 54836517 (+)
XLOC_025769 NA non-coding upstream 1145481 54332726 ~ 54336639 (+)
XLOC_025768 NA non-coding upstream 1178496 54289678 ~ 54303624 (+)
XLOC_025796 CU019632.1 non-coding downstream 1130954 56619195 ~ 56622872 (+)
XLOC_025799 NA non-coding downstream 1333458 56821699 ~ 56822203 (+)

Expression


Co-expression Network