Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965611 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 41725469 ~ 41728987 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053021.1 | False | 410 | mRNA | 0.39 | 2 | 41725521 | 41728987 |
| TU805945 | True | 260 | lncRNA | 0.35 | 2 | 41725469 | 41725853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529916 | LOC106571797 | coding | downstream | 756043 | 40958142 ~ 40969478 (-) |
| LOC118965517 | NA | coding | downstream | 925484 | 40779851 ~ 40800037 (-) |
| LOC110529912 | LOC106571799 | coding | downstream | 945890 | 40724397 ~ 40779631 (-) |
| armc2 | armc2 | coding | downstream | 1056020 | 40638271 ~ 40669501 (-) |
| LOC110530919 | cdc40 | coding | downstream | 1560545 | 40132191 ~ 40164976 (-) |
| klhl18 | klhl18 | coding | upstream | 611695 | 42340682 ~ 42420087 (-) |
| puf60a | puf60 | coding | upstream | 702804 | 42431791 ~ 42526586 (-) |
| mycb | myc | coding | upstream | 1870767 | 43599754 ~ 43602305 (-) |
| LOC118965613 | NA | coding | upstream | 2030342 | 43759329 ~ 43763318 (-) |
| efr3a | efr3a | coding | upstream | 2456006 | 44184993 ~ 44436559 (-) |
| G708729 | NA | non-coding | downstream | 2954 | 41705704 ~ 41722567 (-) |
| G708716 | NA | non-coding | downstream | 43523 | 41678186 ~ 41681998 (-) |
| G708715 | NA | non-coding | downstream | 44804 | 41676777 ~ 41680717 (-) |
| G708653 | NA | non-coding | downstream | 63894 | 41402045 ~ 41661627 (-) |
| G708707 | NA | non-coding | downstream | 85466 | 41620080 ~ 41640055 (-) |
| G708738 | NA | non-coding | upstream | 25458 | 41754445 ~ 41762538 (-) |
| G708745 | NA | non-coding | upstream | 28004 | 41756991 ~ 41763423 (-) |
| G708758 | NA | non-coding | upstream | 121914 | 41850901 ~ 41867282 (-) |
| G708761 | NA | non-coding | upstream | 141447 | 41870434 ~ 41884426 (-) |
| G708762 | NA | non-coding | upstream | 154364 | 41883351 ~ 41931521 (-) |
| slc22a16 | LOC106571810 | other | downstream | 1765908 | 39956961 ~ 40017167 (-) |
| G706683 | stxbp5 | other | downstream | 2499208 | 39219644 ~ 39226313 (-) |
| G704874 | NA | other | downstream | 3411718 | 38313489 ~ 38313803 (-) |
| G704702 | NA | other | downstream | 3687175 | 38037725 ~ 38038346 (-) |
| LOC110530908 | otof | other | downstream | 4233364 | 37474229 ~ 37626960 (-) |
| G709272 | NA | other | upstream | 990784 | 42719771 ~ 42720699 (-) |
| G709454 | NA | other | upstream | 1441773 | 43170760 ~ 43171082 (-) |
| G711133 | NA | other | upstream | 2809806 | 44538793 ~ 44539504 (-) |
| G712814 | NA | other | upstream | 3728790 | 45457777 ~ 45458248 (-) |
| crfb16 | LOC106568648 | other | upstream | 4582143 | 46309732 ~ 46325685 (-) |
| LOC118965516 | LOC106588149 | coding | downstream | 1580276 | 40143911 ~ 40145193 (-) |
| G708690 | NA | non-coding | downstream | 174292 | 41521486 ~ 41551177 (-) |
