Item | Value |
---|---|
gene id | efr3a |
gene name | efr3a |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 44184993 ~ 44436559 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
efr3a | Predicted to be involved in protein localization to plasma membrane. Predicted to be active in plasma membrane. Orthologous to human EFR3A (EFR3 homolog A). |
description |
---|
protein EFR3 homolog A |
id | description |
---|---|
K21842 | EFR3; protein EFR3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021612600.2 | False | 7426 | mRNA | 0.45 | 23 | 44184993 | 44436559 |
XM_021612601.2 | False | 7121 | mRNA | 0.46 | 24 | 44184993 | 44436559 |
XM_021612602.2 | True | 7116 | mRNA | 0.46 | 24 | 44184993 | 44436559 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118965613 | NA | coding | downstream | 421675 | 43759329 ~ 43763318 (-) |
mycb | myc | coding | downstream | 582688 | 43599754 ~ 43602305 (-) |
puf60a | puf60 | coding | downstream | 1658407 | 42431791 ~ 42526586 (-) |
klhl18 | klhl18 | coding | downstream | 1764906 | 42340682 ~ 42420087 (-) |
LOC118965611 | NA | coding | downstream | 2456006 | 41725469 ~ 41728987 (-) |
LOC110529115 | NA | coding | upstream | 544410 | 44980969 ~ 44984268 (-) |
basp1 | NA | coding | upstream | 685524 | 45122083 ~ 45173741 (-) |
znf622 | znf622 | coding | upstream | 1048459 | 45485018 ~ 45495101 (-) |
retreg1 | fam134b | coding | upstream | 1072522 | 45509081 ~ 45601564 (-) |
nol7 | nol7 | coding | upstream | 1242300 | 45678859 ~ 45684992 (-) |
G710822 | NA | non-coding | downstream | 89035 | 44094015 ~ 44095958 (-) |
G710820 | NA | non-coding | downstream | 96304 | 44088363 ~ 44088689 (-) |
G710819 | NA | non-coding | downstream | 97132 | 44087661 ~ 44087861 (-) |
G710817 | NA | non-coding | downstream | 98583 | 44086173 ~ 44086410 (-) |
G710809 | NA | non-coding | downstream | 109757 | 44074758 ~ 44075236 (-) |
G711007 | LOC106584485 | non-coding | upstream | 1346 | 44437905 ~ 44438369 (-) |
G711107 | NA | non-coding | upstream | 85435 | 44521994 ~ 44522225 (-) |
G711121 | NA | non-coding | upstream | 95406 | 44531965 ~ 44532192 (-) |
G711131 | NA | non-coding | upstream | 101266 | 44537825 ~ 44538121 (-) |
G712181 | NA | non-coding | upstream | 113710 | 44550269 ~ 44629270 (-) |
G709454 | NA | other | downstream | 1013911 | 43170760 ~ 43171082 (-) |
G709272 | NA | other | downstream | 1464294 | 42719771 ~ 42720699 (-) |
slc22a16 | LOC106571810 | other | downstream | 4225380 | 39956961 ~ 40017167 (-) |
G706683 | stxbp5 | other | downstream | 4958680 | 39219644 ~ 39226313 (-) |
G704874 | NA | other | downstream | 5871190 | 38313489 ~ 38313803 (-) |
G711133 | NA | other | upstream | 102234 | 44538793 ~ 44539504 (-) |
G712814 | NA | other | upstream | 1021218 | 45457777 ~ 45458248 (-) |
crfb16 | LOC106568648 | other | upstream | 1874571 | 46309732 ~ 46325685 (-) |
LOC110529973 | LOC106568664 | other | upstream | 2614908 | 47051073 ~ 47067973 (-) |
G714425 | LOC106568665 | other | upstream | 2741865 | 47178424 ~ 47178736 (-) |