znf622 (znf622)


Basic Information

Item Value
gene id znf622
gene name znf622
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 45485018 ~ 45495101 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612608.2
ttttattttgaaaatgtcCGAAATTCCATGACCTGGAAATACTTTTGAAGTGTCGCTGAAACCCACGTGTGGAGGAAGACAAGTTTGCAGTCGTTTGCATAAACACGTAGTTCGCTTCCAAATTTTCTTCAAGGAGGGCTTTGAATTGGTTGACTTTAGAATGAATATTCCCATTAACTACGACGACGAACCTGCCCCCACAAAAGTTCATGCCACAACCATGTCCTCGTATACCTGCATCAGCTGTCGTGTGGCCTTCGCAGATGGTGAGGTCCAGCGTGCCCACTACAAAACCGACTGGCACCGTTACAACCTGAAACGCAAAGTTGCCGACATGCCCCCTGTGACTGCAGAGAATTTCCAGGAGCGTGTGCTGGCGCAACGGGCCGCCACCGAACAACAGGTGACTGGCGCCACTGTCAGCGAGGGCTGCACCACGTGCAACAAGAAGTTTTCCAGCTCCAATGCCTACCAGAACCACCTGCAGTCCCACAAGCACCAGCAGGCAGAGAAGCAGGCCTTGCTGGCAGCCCAGAAGAAAGTGGAGATGATGAATGAGAAAAAcctggagaagggccttggggaCGACGGCAAGGTGGACCACAATGCCAAGAACGAAGCGCTACAGCAGGCCCTAAAGCCGCCGCAACGGCCCAATCCGGAAAAGGCCCAGGCTTCAGGAGTGGAGAGGCCAGCAGCGGATAAGGCCAAGCCGGAGAAACCGCCCAGGCTGCAATGGTTTGAGGGGCAAGcaaagaagatggagggagaggaattGGCCACAGCTGAGGAAGAAGAGTGGGAGGATGTGGATGGCGACAATGACATGGATGATGATGACTTCGAGGAAGATGCTGACGAAACCATGGAGCACGAGGAAGGGGATGGTGCTGCTTCGGCTTCCCCCCACCACGCCGTTCTACCAGGGGCCATCCCCCCCACGGACTGTTTGTTCTGCCCCCACCACTCTCACTCACTCCTCAAAAACCTGGCTCACATGACAAAAGTGCACAGCTTCTTCCTGCCCGACCTGGAATTTCTAATCAACCTCAAGGGACTAATTTGCTACCTGGGAGAGAAAGTGGGCGCTGGTAAGGTGTGTCTGTGGTGTAACGAGAAAGGTCGCTCCTTTTACTCCACTGAGGCAGTACAGGGCCACATGACTGACAAAAGCCACTGCAAGCTCTTCACCGACGGAGATGCATCGCTGGAGTTTGCCGACTTCTACGACTTCAGGACAAGTTATCCTGACCAGAAAGAGGGAGATGATGTTGAGATGGAGGATGAAGAGTTGCCGGACGGGAAGAACATAGACTACGATGATGATACGCTGGAGCTCACCCTTCCCTCAGGTGCTAAGATTGGCCACCGCTCTCTGATGCGATACTACAAGCAGCGTTTCGGCGCACCCAGGACTGTGGCGTTGGCCCACAACAGGAACGCAGTGGGTCGGGTACTCAGGCAGTACAAGGCCCTGGGCTGGGGTGGAGACATGGGTAAAAACTCTTTCCATCAGAACCAGAAGGACATGAAGTTTGTCCAGAAGATGAAGTCAAGGTGGATGCTGAAGATAGGCATGGGCAACAACTCTAACAAACAGACCCACTTCAGGCTCCAAGTCATGTTCTAGTCCCTTGACAGAAAATACAGCGTTAGATCCCCATATACCTGACTCTCATATCATTGGACAGTCCCTAAACCTTTTACGGCTAATGTCTTGCATCGTTCAAAGATGTCTATTGTAAACATTCAGCACTCGTTATATCTGCTGCATATTGCAAAGGACTtcaccatgacataattttcagagCCGTTAATATTTACTGGATATGTCATATTCTATTCATGATCCGAGGTCCTATACAAAATACTGAGTTACTGTTTTGTATTTTGACAAATGGCTGTATATTTCACATCATGAAATTCTGACTTGGATAATTTGTCTTAATTCATGCTGTCATTCCAGCAAGTAATTGTTTATAAAATACAATTGAGGTTGAGTAATAAACATTAAGGAATCGTTATGTTTCACATTTGACAAATTTAACTGATTCCATTGGTAAATATGACAATTTTATGCCCATTTGGTTATTGAGTTTATGGGTATTTATTTGTGCAAAGCACAAATAGAGGGATCAGTCACTTTGGACAGGTTTTTGCCAGCAAAATTAATCAAACATATTGTTGCAAATTCAGGAGGAAGCCATGACCGTGATTATAACCCAGGTCCAGTGACTGTCAAGCCAACCCCTTAACTGTTACGACAGGAGGTCTCAAACTCTTAACACCTAGCTACCTTGTTAAGGTCGCTACAACGTTTTTAGAAGTCAAAGGTATATTTCCCCAAAATTTGAAAATATAATTTGCTTCCTGAACTTGCAGTCTAAGGACAATGAGAAACTGCAATCCACACTGGTTGTGTTTAATACACAGAGCAAAAATAGAAAAGCAATGTACAGTGTTggtgctgaaataaaagatcccagaaatgttccatatacaaaaaaaatgtatttctcaaatgttgtgcacaaatttgtttatatccctgttggTGATGAGTTGTTGCCGCCTcaagtcattttagagaatttggcagtacatccacgGAGAcgtgctgatgtcaatgttgtgaacagagtgccccatgttgGCGGTCAGATTttggtatgagcaggcataagctacagacagcGAACACAGTTATATTTTAGCATTGGCAATTTCAATGTAAAGATACCGTGACACGATCCtgtgccatcacctcatgtttcagcataatgcaTGGCacaaaggatctgtacacaattggaagctgaaaatgtaactcagtgaaatctttTGAAATAGTTTCCTGTTAagttttatatttgtgttcagtgtataatGTTATTCCAATGCCCTAGAAAATAAAGGCTAATTTCCTTGAA
>XM_021612609.2
cttttattttgaaaatgtcCGAAATTCCATGACCTGGAAATACTTTTGAAGTGTCGCTGAAACCCACGTGTGGAGGAAGACAAGTTTGCAGTCGTTTGCATAAACACGTAGTTCGCTTCCAAATTTTCTTCAAGGAGGGCTTTGAATTGGTTGACTTTAGAATGAATATTCCCATTAACTACGACGACGAACCTGCCCCCACAAAAGTTCATGCCACAACCATGTCCTCGTATACCTGCATCAGCTGTCGTGTGGCCTTCGCAGATGGTGAGGTCCAGCGTGCCCACTACAAAACCGACTGGCACCGTTACAACCTGAAACGCAAAGTTGCCGACATGCCCCCTGTGACTGCAGAGAATTTCCAGGAGCGTGTGCTGGCGCAACGGGCCGCCACCGAACAACAGGTGACTGGCGCCACTGTCAGCGAGGGCTGCACCACGTGCAACAAGAAGTTTTCCAGCTCCAATGCCTACCAGAACCACCTGCAGTCCCACAAGCACCAGCAGGCAGAGAAGCAGGCCTTGCTGGCAGCCCAGAAGAAAGTGGAGATGATGAATGAGAAAAAcctggagaagggccttggggaCGACGGCAAGGTGGACCACAATGCCAAGAACGAAGCGCTACAGCAGGCCCTAAAGCCGCCGCAACGGCCCAATCCGGAAAAGGCCCAGGCTTCAGGAGTGGAGAGGCCAGCAGCGGATAAGGCCAAGCCGGAGAAACCGCCCAGGCTGCAATGGTTTGAGGGGCAAGcaaagaagatggagggagaggaattGGCCACAGCTGAGGAAGAGTGGGAGGATGTGGATGGCGACAATGACATGGATGATGATGACTTCGAGGAAGATGCTGACGAAACCATGGAGCACGAGGAAGGGGATGGTGCTGCTTCGGCTTCCCCCCACCACGCCGTTCTACCAGGGGCCATCCCCCCCACGGACTGTTTGTTCTGCCCCCACCACTCTCACTCACTCCTCAAAAACCTGGCTCACATGACAAAAGTGCACAGCTTCTTCCTGCCCGACCTGGAATTTCTAATCAACCTCAAGGGACTAATTTGCTACCTGGGAGAGAAAGTGGGCGCTGGTAAGGTGTGTCTGTGGTGTAACGAGAAAGGTCGCTCCTTTTACTCCACTGAGGCAGTACAGGGCCACATGACTGACAAAAGCCACTGCAAGCTCTTCACCGACGGAGATGCATCGCTGGAGTTTGCCGACTTCTACGACTTCAGGACAAGTTATCCTGACCAGAAAGAGGGAGATGATGTTGAGATGGAGGATGAAGAGTTGCCGGACGGGAAGAACATAGACTACGATGATGATACGCTGGAGCTCACCCTTCCCTCAGGTGCTAAGATTGGCCACCGCTCTCTGATGCGATACTACAAGCAGCGTTTCGGCGCACCCAGGACTGTGGCGTTGGCCCACAACAGGAACGCAGTGGGTCGGGTACTCAGGCAGTACAAGGCCCTGGGCTGGGGTGGAGACATGGGTAAAAACTCTTTCCATCAGAACCAGAAGGACATGAAGTTTGTCCAGAAGATGAAGTCAAGGTGGATGCTGAAGATAGGCATGGGCAACAACTCTAACAAACAGACCCACTTCAGGCTCCAAGTCATGTTCTAGTCCCTTGACAGAAAATACAGCGTTAGATCCCCATATACCTGACTCTCATATCATTGGACAGTCCCTAAACCTTTTACGGCTAATGTCTTGCATCGTTCAAAGATGTCTATTGTAAACATTCAGCACTCGTTATATCTGCTGCATATTGCAAAGGACTtcaccatgacataattttcagagCCGTTAATATTTACTGGATATGTCATATTCTATTCATGATCCGAGGTCCTATACAAAATACTGAGTTACTGTTTTGTATTTTGACAAATGGCTGTATATTTCACATCATGAAATTCTGACTTGGATAATTTGTCTTAATTCATGCTGTCATTCCAGCAAGTAATTGTTTATAAAATACAATTGAGGTTGAGTAATAAACATTAAGGAATCGTTATGTTTCACATTTGACAAATTTAACTGATTCCATTGGTAAATATGACAATTTTATGCCCATTTGGTTATTGAGTTTATGGGTATTTATTTGTGCAAAGCACAAATAGAGGGATCAGTCACTTTGGACAGGTTTTTGCCAGCAAAATTAATCAAACATATTGTTGCAAATTCAGGAGGAAGCCATGACCGTGATTATAACCCAGGTCCAGTGACTGTCAAGCCAACCCCTTAACTGTTACGACAGGAGGTCTCAAACTCTTAACACCTAGCTACCTTGTTAAGGTCGCTACAACGTTTTTAGAAGTCAAAGGTATATTTCCCCAAAATTTGAAAATATAATTTGCTTCCTGAACTTGCAGTCTAAGGACAATGAGAAACTGCAATCCACACTGGTTGTGTTTAATACACAGAGCAAAAATAGAAAAGCAATGTACAGTGTTggtgctgaaataaaagatcccagaaatgttccatatacaaaaaaaatgtatttctcaaatgttgtgcacaaatttgtttatatccctgttggTGATGAGTTGTTGCCGCCTcaagtcattttagagaatttggcagtacatccacgGAGAcgtgctgatgtcaatgttgtgaacagagtgccccatgttgGCGGTCAGATTttggtatgagcaggcataagctacagacagcGAACACAGTTATATTTTAGCATTGGCAATTTCAATGTAAAGATACCGTGACACGATCCtgtgccatcacctcatgtttcagcataatgcaTGGCacaaaggatctgtacacaattggaagctgaaaatgtaactcagtgaaatctttTGAAATAGTTTCCTGTTAagttttatatttgtgttcagtgtataatGTTATTCCAATGCCCTAGAAAATAAAGGCTAATTTCCTTGAA
>XM_036985484.1
cttttattttgaaaatgtcCGAAATTCCATGACCTGGAAATACTTTTGAAGTGTCGCTGAAACCCACGTGTGGAGGAAGACAAGTTTGCAGTCGTTTGCATAAACACGTAGTTCGCTTCCAAATTTTCTTCAAGGAGGGCTTTGAATTGGTTGACTTTAGAATGAATATTCCCATTAACTACGACGACGAACCTGCCCCCACAAAAGTTCATGATGGTGAGGTCCAGCGTGCCCACTACAAAACCGACTGGCACCGTTACAACCTGAAACGCAAAGTTGCCGACATGCCCCCTGTGACTGCAGAGAATTTCCAGGAGCGTGTGCTGGCGCAACGGGCCGCCACCGAACAACAGGTGACTGGCGCCACTGTCAGCGAGGGCTGCACCACGTGCAACAAGAAGTTTTCCAGCTCCAATGCCTACCAGAACCACCTGCAGTCCCACAAGCACCAGCAGGCAGAGAAGCAGGCCTTGCTGGCAGCCCAGAAGAAAGTGGAGATGATGAATGAGAAAAAcctggagaagggccttggggaCGACGGCAAGGTGGACCACAATGCCAAGAACGAAGCGCTACAGCAGGCCCTAAAGCCGCCGCAACGGCCCAATCCGGAAAAGGCCCAGGCTTCAGGAGTGGAGAGGCCAGCAGCGGATAAGGCCAAGCCGGAGAAACCGCCCAGGCTGCAATGGTTTGAGGGGCAAGcaaagaagatggagggagaggaattGGCCACAGCTGAGGAAGAAGAGTGGGAGGATGTGGATGGCGACAATGACATGGATGATGATGACTTCGAGGAAGATGCTGACGAAACCATGGAGCACGAGGAAGGGGATGGTGCTGCTTCGGCTTCCCCCCACCACGCCGTTCTACCAGGGGCCATCCCCCCCACGGACTGTTTGTTCTGCCCCCACCACTCTCACTCACTCCTCAAAAACCTGGCTCACATGACAAAAGTGCACAGCTTCTTCCTGCCCGACCTGGAATTTCTAATCAACCTCAAGGGACTAATTTGCTACCTGGGAGAGAAAGTGGGCGCTGGTAAGGTGTGTCTGTGGTGTAACGAGAAAGGTCGCTCCTTTTACTCCACTGAGGCAGTACAGGGCCACATGACTGACAAAAGCCACTGCAAGCTCTTCACCGACGGAGATGCATCGCTGGAGTTTGCCGACTTCTACGACTTCAGGACAAGTTATCCTGACCAGAAAGAGGGAGATGATGTTGAGATGGAGGATGAAGAGTTGCCGGACGGGAAGAACATAGACTACGATGATGATACGCTGGAGCTCACCCTTCCCTCAGGTGCTAAGATTGGCCACCGCTCTCTGATGCGATACTACAAGCAGCGTTTCGGCGCACCCAGGACTGTGGCGTTGGCCCACAACAGGAACGCAGTGGGTCGGGTACTCAGGCAGTACAAGGCCCTGGGCTGGGGTGGAGACATGGGTAAAAACTCTTTCCATCAGAACCAGAAGGACATGAAGTTTGTCCAGAAGATGAAGTCAAGGTGGATGCTGAAGATAGGCATGGGCAACAACTCTAACAAACAGACCCACTTCAGGCTCCAAGTCATGTTCTAGTCCCTTGACAGAAAATACAGCGTTAGATCCCCATATACCTGACTCTCATATCATTGGACAGTCCCTAAACCTTTTACGGCTAATGTCTTGCATCGTTCAAAGATGTCTATTGTAAACATTCAGCACTCGTTATATCTGCTGCATATTGCAAAGGACTtcaccatgacataattttcagagCCGTTAATATTTACTGGATATGTCATATTCTATTCATGATCCGAGGTCCTATACAAAATACTGAGTTACTGTTTTGTATTTTGACAAATGGCTGTATATTTCACATCATGAAATTCTGACTTGGATAATTTGTCTTAATTCATGCTGTCATTCCAGCAAGTAATTGTTTATAAAATACAATTGAGGTTGAGTAATAAACATTAAGGAATCGTTATGTTTCACATTTGACAAATTTAACTGATTCCATTGGTAAATATGACAATTTTATGCCCATTTGGTTATTGAGTTTATGGGTATTTATTTGTGCAAAGCACAAATAGAGGGATCAGTCACTTTGGACAGGTTTTTGCCAGCAAAATTAATCAAACATATTGTTGCAAATTCAGGAGGAAGCCATGACCGTGATTATAACCCAGGTCCAGTGACTGTCAAGCCAACCCCTTAACTGTTACGACAGGAGGTCTCAAACTCTTAACACCTAGCTACCTTGTTAAGGTCGCTACAACGTTTTTAGAAGTCAAAGGTATATTTCCCCAAAATTTGAAAATATAATTTGCTTCCTGAACTTGCAGTCTAAGGACAATGAGAAACTGCAATCCACACTGGTTGTGTTTAATACACAGAGCAAAAATAGAAAAGCAATGTACAGTGTTggtgctgaaataaaagatcccagaaatgttccatatacaaaaaaaatgtatttctcaaatgttgtgcacaaatttgtttatatccctgttggTGATGAGTTGTTGCCGCCTcaagtcattttagagaatttggcagtacatccacgGAGAcgtgctgatgtcaatgttgtgaacagagtgccccatgttgGCGGTCAGATTttggtatgagcaggcataagctacagacagcGAACACAGTTATATTTTAGCATTGGCAATTTCAATGTAAAGATACCGTGACACGATCCtgtgccatcacctcatgtttcagcataatgcaTGGCacaaaggatctgtacacaattggaagctgaaaatgtaactcagtgaaatctttTGAAATAGTTTCCTGTTAagttttatatttgtgttcagtgtataatGTTATTCCAATGCCCTAGAAAATAAAGGCTAATTTCCTTGAA

Function

symbol description
znf622 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to be located in cytoplasm. Predicted to be part of preribosome, large subunit precursor. Is expressed in optic cup and optic tectum. Orthologous to human ZNF622 (zinc finger protein 622).

NR:

description
PREDICTED: zinc finger protein 622 isoform X1

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K14816 REI1; pre-60S factor REI1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612608.2 False 2930 mRNA 0.46 8 45485018 45495100
XM_021612609.2 False 2928 mRNA 0.46 8 45485018 45495101
XM_036985484.1 True 2880 mRNA 0.46 8 45485018 45495101

Neighbor

gene id symbol gene type direction distance location
basp1 NA coding downstream 311277 45122083 ~ 45173741 (-)
LOC110529115 NA coding downstream 500750 44980969 ~ 44984268 (-)
efr3a efr3a coding downstream 1048459 44184993 ~ 44436559 (-)
LOC110529930 NA coding downstream 1090379 44390878 ~ 44394639 (-)
LOC118965613 NA coding downstream 1721700 43759329 ~ 43763318 (-)
retreg1 fam134b coding upstream 13980 45509081 ~ 45601564 (-)
nol7 nol7 coding upstream 183758 45678859 ~ 45684992 (-)
amph amph coding upstream 298147 45793248 ~ 45924730 (-)
tmem71 tmem71 coding upstream 511310 46006411 ~ 46033000 (-)
ift57 ift57 coding upstream 566642 46061743 ~ 46074046 (-)
G712815 NA non-coding downstream 22397 45459133 ~ 45462621 (-)
G712812 myo10 non-coding downstream 28491 45455909 ~ 45456527 (-)
G712810 myo10 non-coding downstream 31702 45453032 ~ 45453316 (-)
G712809 NA non-coding downstream 32584 45452208 ~ 45452434 (-)
G712806 NA non-coding downstream 35157 45449595 ~ 45449861 (-)
G712949 NA non-coding upstream 162075 45657176 ~ 45711563 (-)
G712967 NA non-coding upstream 216994 45712095 ~ 45712403 (-)
G712968 NA non-coding upstream 217515 45712616 ~ 45712839 (-)
G712969 NA non-coding upstream 218445 45713546 ~ 45713820 (-)
G712972 NA non-coding upstream 222564 45717665 ~ 45717876 (-)
G712814 NA other downstream 26770 45457777 ~ 45458248 (-)
G711133 NA other downstream 945514 44538793 ~ 44539504 (-)
G709454 NA other downstream 2313936 43170760 ~ 43171082 (-)
G709272 NA other downstream 2764319 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 5525405 39956961 ~ 40017167 (-)
crfb16 LOC106568648 other upstream 816029 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 1556366 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 1683323 47178424 ~ 47178736 (-)
G715865 NA other upstream 2793841 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 3047190 48356004 ~ 48616588 (-)

Expression


Co-expression Network