Gene
RNA
| Item | Value |
|---|---|
| gene id | retreg1 |
| gene name | fam134b |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 45509081 ~ 45601564 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| reticulophagy receptor FAM134B isoform X1 |
| id | description |
|---|---|
| K23880 | RETREG; reticulophagy regulator |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021612611.2 | False | 4654 | mRNA | 0.43 | 7 | 45509081 | 45546117 |
| XM_021612610.2 | True | 4992 | mRNA | 0.44 | 9 | 45509081 | 45601564 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| znf622 | znf622 | coding | downstream | 13980 | 45485018 ~ 45495101 (-) |
| basp1 | NA | coding | downstream | 335340 | 45122083 ~ 45173741 (-) |
| LOC110529115 | NA | coding | downstream | 524813 | 44980969 ~ 44984268 (-) |
| efr3a | efr3a | coding | downstream | 1072522 | 44184993 ~ 44436559 (-) |
| LOC110529930 | NA | coding | downstream | 1114442 | 44390878 ~ 44394639 (-) |
| nol7 | nol7 | coding | upstream | 77295 | 45678859 ~ 45684992 (-) |
| amph | amph | coding | upstream | 191684 | 45793248 ~ 45924730 (-) |
| tmem71 | tmem71 | coding | upstream | 404847 | 46006411 ~ 46033000 (-) |
| ift57 | ift57 | coding | upstream | 460179 | 46061743 ~ 46074046 (-) |
| cavin4a | LOC106568643 | coding | upstream | 521180 | 46122744 ~ 46133988 (-) |
| G712815 | NA | non-coding | downstream | 46460 | 45459133 ~ 45462621 (-) |
| G712812 | myo10 | non-coding | downstream | 52554 | 45455909 ~ 45456527 (-) |
| G712810 | myo10 | non-coding | downstream | 55765 | 45453032 ~ 45453316 (-) |
| G712809 | NA | non-coding | downstream | 56647 | 45452208 ~ 45452434 (-) |
| G712806 | NA | non-coding | downstream | 59220 | 45449595 ~ 45449861 (-) |
| G712949 | NA | non-coding | upstream | 55612 | 45657176 ~ 45711563 (-) |
| G712967 | NA | non-coding | upstream | 110531 | 45712095 ~ 45712403 (-) |
| G712968 | NA | non-coding | upstream | 111052 | 45712616 ~ 45712839 (-) |
| G712969 | NA | non-coding | upstream | 111982 | 45713546 ~ 45713820 (-) |
| G712972 | NA | non-coding | upstream | 116101 | 45717665 ~ 45717876 (-) |
| G712814 | NA | other | downstream | 50833 | 45457777 ~ 45458248 (-) |
| G711133 | NA | other | downstream | 969577 | 44538793 ~ 44539504 (-) |
| G709454 | NA | other | downstream | 2337999 | 43170760 ~ 43171082 (-) |
| G709272 | NA | other | downstream | 2788382 | 42719771 ~ 42720699 (-) |
| slc22a16 | LOC106571810 | other | downstream | 5549468 | 39956961 ~ 40017167 (-) |
| crfb16 | LOC106568648 | other | upstream | 709566 | 46309732 ~ 46325685 (-) |
| LOC110529973 | LOC106568664 | other | upstream | 1449903 | 47051073 ~ 47067973 (-) |
| G714425 | LOC106568665 | other | upstream | 1576860 | 47178424 ~ 47178736 (-) |
| G715865 | NA | other | upstream | 2687378 | 48288942 ~ 48289581 (-) |
| dlg1l | LOC106568684 | other | upstream | 2940727 | 48356004 ~ 48616588 (-) |
