proca (proc)


Basic Information

Item Value
gene id proca
gene name proc
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46399019 ~ 46406905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612646.2
GAGGTGAGTATTGTGTTAGGGAACACTGACTGAGCTGGACATTAGTAACACAGACTGTGGACTCACAGTAAACATCTGTAGTTAGTCATTAACACAGTTTAAACAGCACATCCCGTCAGTCCTGTCCCGGCCTTGTTTCTGAAGATTTTCCATTGGCTGCAGGTTCTGTAGACATCATGGGCGAGCTTTTCCTCTGTGTGACTGTGGCTCTCGCTTTGTGGTCGGCTTCAGCTCTCAGCACATCagtgttttccagTGGTCCTGAGGCCCACATGCTTCTGCGCTCCAAAAGGGCCAACACCTTCCTGGAGGAACTGAAGCCTCCATCGATGGAGCGGGAATGCCTGGAGGAGAGATGTGAGTTTGAGGAGGCAAGGGAGATTTTCATAGCCAGGGAAGCCACGTTGGAATTCTGGACGGTTTATACAGATGGAAATCAGTGCATTTCAAACCCATGTGTGAATGGGACCTGTGTGGACCTCTACCAGTCCTATGCCTGCCGCTGCAATCTAGGATTTGAGGGAAAAGACTGCGACCAACCTAGCacagccactaattgtgcaatAGCCAACGGTGGTTGTGACCATGAGTGCCAAAACCACAAGGATGGCCTGAGGCGTACGTGCAGCTGTGTCCAGGGATACCGTCTCCACCAAAACTCTAGACACTGTGTCCCCGAAGGTGCCCACTCCTGTGGGCAGATACTGGTGGCCAAGACCTCCTACAGTAAACCCATTCAAGGACTACTGCCCTGGCTGGTAGGGGGAGAAATGGGCAAGAAGGGGGAGAGCCCCTGGCAGgcTCTTGTGTTGAATGCAAAGGGAAAGTTTCACTGCGGCGGGGTCTTAATTGATAAGAACTGGGTCCTCACCGCAGCCCATTGCCTGACCAGTAGCCTTCGCTTCAGCGTCAGACTGGGTGACTACGAGCGCTATAAGTTGGAGGGCACCGAAGTCACCGTGCCGGTGATCAAGACCTTCTCTCACCCGAACTATGACAAAGTCACGGTGGACAACGACATCGCCCTGTTGCGCCTGGcctctcctgtctccttctcCGAGTACATCCTCCCGGCATGCCTCCCTAGCCGCGCTCTGGCCCAGGGTGTGCTCCACCTCAACGGCACACGCACAGTGGTGACGGGTTGGGGCAAGGAGGAGCAGAACTCCCAGCGTTTCACCTCAGCCCTCAACTTCATCGAGGTGCCGCTGGTGGAGCATGAGCTGTGTGCCCGTCAGATGGTCAACAACGTGACAGGCAATGTTCTGTGCGCCGGTGTGTTAGGACGGCGGGAGGACGCATGCGAGGGCGACAGTGGCGGCCCAATGGTCACCTTGTACCGTGATACCTGGTTCCTCATCGGCCTAGTGTCCTGGGGTGAGGGCTGTGGTGACGAGGACAAACTGGGCATCTACACCAAGGTGTCCAACTACAATGAGTGGATTGAGAGTGTGCGGAAGGGGTGAGACAAAGCTACTGAGCCCTAAGACAAGTCCCTCTACGCTTCCAATTCCTTCCGTCCATCCTCCCTACTGAGTCTATCCACCCGGCTACAGTATAGATATGTAACATGCTTTGTGAAATAAATCAACACATTCTCAAGTTTCA

Function

symbol description
proc Enables serine-type endopeptidase activity. Involved in several processes, including negative regulation of coagulation; negative regulation of inflammatory response; and positive regulation of establishment of endothelial barrier. Located in Golgi apparatus and endoplasmic reticulum. Implicated in several diseases, including antiphospholipid syndrome; artery disease (multiple); placental abruption; thrombophilia (multiple); and toxic shock syndrome. Biomarker of disseminated intravascular coagulation; myocardial infarction; osteonecrosis; pulmonary embolism; and thrombotic thrombocytopenic purpura.

NR:

description
vitamin K-dependent protein C

GO:

id name namespace
GO:0007596 blood coagulation biological_process
GO:0006508 proteolysis biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01344 PROC; protein C (activated)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612646.2 True 1608 mRNA 0.54 9 46399019 46406905

Neighbor

gene id symbol gene type direction distance location
LOC110529955 NA coding upstream 14765 46378439 ~ 46384254 (+)
saga LOC106568650 coding upstream 22199 46362645 ~ 46376820 (+)
cldn15la LOC106568649 coding upstream 42496 46352786 ~ 46356523 (+)
slc39a6 slc39a6 coding upstream 105155 46264640 ~ 46293864 (+)
LOC110529944 LOC106568640 coding upstream 390031 46003081 ~ 46008988 (+)
wdr33 wdr33 coding downstream 13015 46419920 ~ 46462126 (+)
si:ch1073-184j22.2 LOC106568795 coding downstream 103197 46510102 ~ 46513158 (+)
mfn1a LOC106568656 coding downstream 187498 46594403 ~ 46619166 (+)
LOC118965520 NA coding downstream 297354 46704259 ~ 46714142 (+)
phb2a LOC106568660 coding downstream 455656 46862561 ~ 46898724 (+)
G713340 NA non-coding upstream 25478 46318647 ~ 46373541 (+)
G713292 NA non-coding upstream 152615 46246079 ~ 46246404 (+)
G712121 NA non-coding upstream 254997 46142739 ~ 46144022 (+)
G712061 LOC106568643 non-coding upstream 272781 46122767 ~ 46126238 (+)
G712079 NA non-coding upstream 345009 46053799 ~ 46054010 (+)
G713366 sft2d3 non-coding downstream 55722 46462627 ~ 46463602 (+)
G713371 NA non-coding downstream 56937 46463842 ~ 46464558 (+)
G713404 NA non-coding downstream 57856 46464761 ~ 46465289 (+)
G713406 NA non-coding downstream 59388 46466293 ~ 46466733 (+)
G713368 NA non-coding downstream 60657 46467562 ~ 46468660 (+)
G711912 NA other upstream 604470 45793269 ~ 45794549 (+)
G711845 NA other upstream 751642 45646857 ~ 45647377 (+)
G711021 NA other upstream 1950046 44448584 ~ 44448973 (+)
G709490 NA other upstream 3201377 43196560 ~ 43197642 (+)
G708448 NA other upstream 5014836 41380025 ~ 41384183 (+)
G713405 NA other downstream 58493 46465398 ~ 46466227 (+)
G713574 NA other downstream 309010 46715915 ~ 46769246 (+)
G716035 LOC106581475 other downstream 2130838 48537743 ~ 48544164 (+)
G716133 NA other downstream 2353438 48760343 ~ 48760740 (+)
G716862 NA other downstream 2925936 49332841 ~ 49333772 (+)

Expression


Co-expression Network