dusp28 (LOC106568652)


Basic Information

Item Value
gene id dusp28
gene name LOC106568652
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46407733 ~ 46417579 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612647.2
GTAAGCTATGGATGGGCTTGAGTAGGCATCAGGCAATTGCTGAGTCAGTCAGAGTTTCACCTCCAAAGTCTAGTGATGATGAAGCAGGAGGATAGGATGGTGGTGACACAGCAAACAGGACAGCTGCACAGACTGGCACCAagtctgtgtgtgtccatgtctctGAATCAATGTGATTCTGATTAGTTCATAGGATATCAGTGAATTTATGATTGTGGAATACTGGTGTGTTTATGGTCATAATGAATTGAATTATTAATGTGTTTTCCATCATGCATAACCAGCTTCAAATGTGTGCTTTTTTGTATAGTTCATATCCCCCACTGTGTGAATTTATACTCTTTTAATATATATAATTCAATCTCCTCTCTGATCTACtcttcagatgtgtgtgtgttgtgcatatGTGTGGGTGCACACTGCATGACCACTACACTAAAAAAAGTGATTACCTACTCTATTAAATCTACCCGCAGCTCATCACATAGAATATGAATCACTGTGGATCCTTTGAACGTGAACTAAACTGGTGTTAGGACCCAGGGAGTGCCTGACCGTGGACCTGCCTACCCCCTACAATAAATATAGCTTGCTATTAGGACAGAGTCAGATGGCCAGAGCTGACCGACATGACAACCCCCACATGCCATAGCCTGAAGGAGAGACAGTTTCCCTATGAAGAGTGTGTGTTGCAGTGAGAGAGCAAGTGCGTAGATGGTTTTAGTgagtgtatgtatgtttgtggaATTGATGAATGTCACTGGAAGTGTGATTGGATGTGTTTATATTGTCATTGGGGGGGTGCACGAGAAAAGTGTGAATCTACTTGTGTGCAGTGTGTAGGCtactgttatttatttgtgtgtgtagtgtgagaAAGATACAAGTCAAAAGTGTTGTACACAAgtgcatgtatgtatgtgaaATAGGAGAAAGGAAAGTTGACCttggtgtgagtgagtgtgtgagcgcAGCGCAGGCTTAGTTAGCAAAGGTCGACGTGTCACCAGGGTCAAAGGTCATCCGTCGAAGATGCTCCAGCCGCAGCTCCAGCTGTGCAAGGTCACCAACGCGCTGTTCATCAGCAACGCACGATCGGCCTGCACTGACGACCTCATCCAGCAGGAGGCAGTGACGCTGTGCATCAACGTGTCCAAGCAGCAGCCCTTCCCCGAGTCGTCACGCATCGCTGCGCTGCGTGTGCCCGTCTATGACGACCCCACTGAGGACCTGTACCGCTACTTCGATAGCTGTGCAGACGCTATCCGGGACGAGGCATCCAAGGGAGGCCACACCGTCGTCTATTGCAAGAACGGCCGCAGCCGCTCGGCCACCATCTGCGTGGCGTACCTCATGAAGTACCGCAAGCTCTCATTGGCTGAAGCGTTTACGAAAGTGAGGACTTCACGCTCAGTGGTGGACCCCAACTCGGGATTCTGGGCCCAGCTGGAAAGATATGAGCAAGAGCTGAaaaagaggcagggggaggtggaCAACGCCCCAACCTAATGTTGTGCCAAATTCCTCACCCTCTAGGACCCTGCAGCTCTCCACCGTAAACCACTGTCCTGAAACTCTTTGGGccagtttcccggacacagattaagcctaatccTAGATTAAAAACCATGGTCAATGGAACatctccattttaaattcaggactAGGTTTAATGATACATGAGTTTTACATAGCATTTCTAAAGGACATCTATGTCTGGGAAACTAGCATTGTATCTAAAGACCAGCCTCCGGTCTAGAGGAGCCCCCACCTCTGGAGATGGTAGAAGTTTCCCCTATAATCGCTGGGCCAGGGTCCGATATTTTCCATcctcctaatggttaaggttatgatTTTGGGttgggtaatctgatcctagatctgtggtagGCTAGGGGCTACTTCTACATCGAGCTCCACCCTGTTGGACCCTGGCCCCCTCTACCCCTTAGAGAAACAAAGAGAAGTGTTACTTTTTACCCTCAAAATTATGCTCCATTTGTTCATTACAAAGCCAATGCATTACAAAGCCACATGCTTTGTAATGCATTCTAGATACATTACAAGTATGAATTTATATAACTTCTTATAAGAAGCCATATGGAGTCCTTTTATCAAAAATATGTCTATGTATATGTATTATTAATACATGTGTAGCCTTTAGGCATTTAAAAAGCCTGCTGAAAGGAGCAATGCACTGATATGAATGCTTGTAGCAAGTCATATAATGGAAAAAAGGTATTATAATGCACAAGTGGGTGATAATAGACAATGTAAGGGCCATCATAATGCATTATGTACAGTTGGTTCATAAATCAACCCAATCTTTTAAATGAGATGTCACAATAATGTATATTTCCATGGGGTTGCATAGAGAGTGTTACTCTGGCTCTATAGTCATTGACAGCACTTATGTACCCTTGTACAAACAATGAAGAGGCTGTTGCAGTGCCACCTTTAACCTCTAGAGGGAAGTATTACAATGGAATAGAGTCAAAAACAtgacaaaccagatgggatgcttTGTGGAGATGTACTACCACAGACTTTTTGCGTTGAAATCTCTACAGCTCAGAAACGTTTCTCCTCTGCACATGAAATATTTATCTGAGCAATACTGAATCTTAACTCTGCAGGGATTTAACGAGTCTTAGCCATTAAACGTTCGTTATAGCAGCTAATGTAGAGCAGGTGCAATGAATGACCTGTGCTCAGGTAATACAACACGTTACAATAGAGGGCTGCTATTGACTAGATAaagcagcaaatcaaatcaaattttattggtcgcgtacacatatttggcagatgttatcgcgggtgtagcgaaatgcataTGTTCCTATCTCCAACactgcagtaatacctaacaatacaaaacaatacatgcaaatccccaaaataaaaagaaagcaatatagaaatattagaacaagcaatgtcagagtcctgaatataaatatatatatgtatattatggtgtgtatagacattatggacagtatatgaatagaacatgtgtgtacagcagtagttactgtatatatattctgGACACTGACATTgcttgttctgatatttcttaatttctttcattacatttttttcattTGTGTGTATGGTTTTGCATTGTTCGgtgtactgcactgttggagctagaaacgtAAGCATtctgctgcacctgcgataaaaTTGACAAagtatgtgtacgtgaccaataaagtttgatttgctTTGGCTGTTGGGGTTCTTATATGGCGCTTATATGGGTGCCCACTTGCCCCCTGATTTGTTATTGGGAGTGCATCCCAGCACCCATTTTATGTAAATCTGTCTGCAACCATGATCAGATGTTCCCCTTCTATGGTTATGATGCAAGTGGTAGCAAAGCGGTTAGAGCATagagccagtaactgaaaggtcactggtttaaATCCCCAAGCCAActatgtgaaaaatctgtcgacgtACCCTTAAGGAAGGCACTTTGCACTAATTGCTTCTGAATAAGACTGTCTGCTGAACGTATACATGGGGGACATCTTGGTTGCTTTCAGACATTTTCAACACTCTGTTCCCTTTGTCAGTTTTTGTTTAATGTTGTTCATTGCTATAGGTTCATCTATGACCTGTCTTTGGTGTTACATGATTTATGTTTAGATGCATTATGTGCCATGCGCTGCTTGTGTCGCCTAAAATATTTGAGACTTTACTGAAGCTATGTGTCTGACATGTTTAAGCCATAAAAAAAA

Function

NR:

description
dual specificity phosphatase 28-like isoform X1

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0000188 inactivation of MAPK activity biological_process
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612647.2 True 3752 mRNA 0.43 2 46407733 46417579
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Neighbor

gene id symbol gene type direction distance location
LOC110529956 LOC106568794 coding downstream 12615 46388942 ~ 46395118 (-)
crfb16 LOC106568648 coding downstream 82048 46309732 ~ 46325685 (-)
tmeff1a tmeff1 coding downstream 166296 46163653 ~ 46241437 (-)
cavin4a LOC106568643 coding downstream 273745 46122744 ~ 46133988 (-)
ift57 ift57 coding downstream 333687 46061743 ~ 46074046 (-)
sft2d3 sft2d3 coding upstream 45046 46462625 ~ 46463692 (-)
si:ch1073-184j22.1 LOC106568655 coding upstream 110071 46527650 ~ 46556891 (-)
pex5lb LOC106568657 coding upstream 234249 46651828 ~ 46803169 (-)
nebl LOC106568663 coding upstream 598306 47015885 ~ 47027075 (-)
dnajc1 dnjc1 coding upstream 609615 47027194 ~ 47035362 (-)
G713742 proc non-coding downstream 821 46399016 ~ 46406912 (-)
G713738 NA non-coding downstream 20004 46381566 ~ 46387729 (-)
G713736 NA non-coding downstream 31087 46365425 ~ 46376646 (-)
G713660 NA non-coding downstream 68689 46254476 ~ 46339044 (-)
G713667 NA non-coding downstream 134961 46264380 ~ 46272772 (-)
G713766 NA non-coding upstream 43111 46460690 ~ 46462111 (-)
G713771 NA non-coding upstream 46405 46463984 ~ 46464406 (-)
G713772 NA non-coding upstream 47189 46464768 ~ 46465308 (-)
G713773 NA non-coding upstream 48043 46465622 ~ 46466193 (-)
G713774 NA non-coding upstream 49037 46466616 ~ 46466827 (-)
G712814 NA other downstream 949485 45457777 ~ 45458248 (-)
G711133 NA other downstream 1868229 44538793 ~ 44539504 (-)
G709454 NA other downstream 3236651 43170760 ~ 43171082 (-)
G709272 NA other downstream 3687034 42719771 ~ 42720699 (-)
LOC110529973 LOC106568664 other upstream 633888 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 760845 47178424 ~ 47178736 (-)
G715865 NA other upstream 1871363 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 2124712 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 2342333 48759912 ~ 48761163 (-)

Expression

dusp28(LOC106568652) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 6.
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dusp28(LOC106568652) Expression in each Bioproject

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dusp28(LOC106568652) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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Co-expression Network