phb2a (LOC106568660)


Basic Information

Item Value
gene id phb2a
gene name LOC106568660
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46862561 ~ 46898724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612665.2
GCAGCAGGTGTGTTTAGCTCGCTGAAATAAATAAAGCCTACATTTTTCAATGATGCTCCACCCACAGGAAGTGCTACTTTCAACACACGCGACCTTCGATTCACTTCAAGTTACGTTTTCCAACAAGAACAAAGCATGGCGAATAAAGAGCCCGGTGGTTTGCTAGGGCAGTTGAGGCAGATGGCTAGCAGAATGGGCTCTGGTCCAAGGGGTGCAGGTCTTGGGTTCAAGCTGCTTATAGGGGCAGGAGCACTTGCCTATGGAGTCAAGGAAGCCACATACACAGTGGAAGGTGGTCAGAGAGCCATCATCTTCAACAGGATTGGTGGGATGCAGATGGACACGGTACTCGCTGAGGGGCTCCACATTAGGATACCATGGTTCCAGTACCCTGTCATCTATGACATAAGGGCGAGACCAAGAAAGATATCGTCCCTAACCGGAAGCAAAGACCTGCAGATGGTGAACATCGCCCTGCGTGTGCTGTCCCGTCCTGTGGCCTCCAACCTGCCTGCCATGTACCAGCAGCTCGGCAAGGATTATGATGAGAAGGTGCTGCCATCCATCGTCAATGAGGTGCTGAAGAGTGTGGTGGCCAAGTTCAACGCCTCGCAGCTCATCACACAGAGAGCTCAGGTGTCCCTGATGATTCGGCGGGAGCTCTTTGAACGGGCCAAGGACTTCAACATCATCCTGGACGATGTGGCCATCACCGAGTTGAGCTTCAGCAGGGAGTACACTGCCGCGGTGGAAGCAAAGCAAGTCGCCCAGCAGGAGGCACAGAGGGCCTTCTTCTATGTGGAGAAAGCCTTGCAGGACCAGAGGCAGAAGATCATCCAGGCTGAAGGCGAGGCAGAGGCTGCTAAAATGTTGGGTGAGGCGGTGACAAAGAACCCTGGCTACCTGAAACTCCGGAAGATCCGAGCAGCTCAGAACATTGCCAAGACGGTGGCGACATCGCAGAACAAGGTGTACCTGAGTGCAGATAACCTAGTGTTGAACCTCCAGGACAACACAAGCAACAGCTTCAGCAATTTGAGCAGGTTGGGAGAAATAGGCTGGACGAGCCCTGAGATTATCAGCAAGGCTGTTCAAGAGACTCTTCCAGAGATTGAGGGAGAATTGAAGACCCCTGAGACAGCCAGTGTTCCTGCAATGCTTCCAGGGATTGAGGAACAACACTTCTCGAAGAGCCCTGATATTGTCAGCATGGCTGTTCCAAAGATTGAGGAGGAACATGAATTGAAGTTCCATGAGATGGTCGTTGTTCCAGAGACATGGAGTGAGGCGGGAGAATACCCGGTCCCCCATATTGCGGCGGCGGGTCCTGGGGACGTGGCGCAAAATGGCGAGGCTTGAACGTAGGtttatcGTTGCCGAGGTAAAGGGAAGCGTCCCTGAAGAGTATGCATTCCGTATCTTCAATTTGAGCCATCTCTACACATTATACCTCTTCGCCACACAGTGGTTTTCAACACTAGTCCTGGAAGACCCCTATGCGTACAGGTTTTTCTGTCTAGTCATTCCCTTGAATTATGTTATGTTCAATTTGTCTTTGAAATGGCTTTCCACATATGGTATCATGTTACAGTTGCCTGGCTTTAAATGTAATGATGTACAGATGAATAGAAACCGGATTGTGCCGGGGTACTCACAGACCAGCACAAAGGAGCACTTATTTGTTTCTACAAAGTGTATATCCTTGTCACAGTGCCTAACTCTTGGCCTGTATTCACAGAGCCTCAGAGTTGGTGTGCTGATATACAGTAGCATTAGTTTTAGATTATATAGAAAGAGAGcgctgatctaagatcaggtcCTCTTCTCCAATATGCTTTTTGGATGTGGGCCCTGGTTTGAGTTAACAACTCCATAGTGGCACGAAATCAACTAACTACACAGCAGGTGCAACCCAGTGGTTTCTTACACTCCAAGTGTCATCACCTCCCTGCCTTTATTATTTAGTTAAATTTCGATGTGACAACATCATGCATCGGAGAACCATCCATAGAGTCCTACTCTGACATTGCTAGGAGACAGGCTCCTCCGTACTTTTACTATATTTGTGTTCTGTAACACTCAACATAAGCCGTTTTTGTCCTGGATATACCTGTTGAAAGTGTCATGCCGGATCTTCGCGAAGTGTCGTGAATGAATACCAATGAATCTTAATGTCCTGTGTCACGAAACAATGTTACACCAGCGTAATACATCTAATTGTAATAAATGCTTATTTTCTTTGGttcatgtcccccccccccccccttttcatttacatttttttttcactgCATTTCAACCTATTTGTTCATCTTTGCTTGAGGAAAAAGGTCTTCATTACTGTGTTCGTAATCCTAACTAGAGGCTGAAGCACTCACATTGGGTttgaataaatacatgtttttggaTCACAACAGCGTCTACGTGATCTCTAACTTCTGACTTGATACAAAACTGTTTAATCCTTTATGCACAATAATATCAGACTGTCCTGTGCTGTCATGATACCATGCAACATTTGCAGCAGTGTGTTCCATAACCCTTATACTGGCTACTTTAACACATTTGGGTGTAGCAGATTCTAGGCTTGGGTGATATATTGGGTATTTTGAAATACTGATGGTATAAATTTCAATATCGTTTAAGCTGTTAGAGGAGTTGATCCTGGTTCGATAACACTGTCTTCCTTGAGCTCGTTAATAGTAGAATGTTAATATCTGAAGATGGCAGAAAGGCTTGTCTCTTTTTGGCAATGAcatggagtggaatgttagctaaaaagaCTGGTACCAGACAAGACATTCAATCCactcctggatcaagatccctgttgcctAAAATTGTGTGCACTTCCAGAAATACCGTTTACCCCAGTATTGTACAGAAATGCTATGACTGTATTAAATTCTGGATACTGCCCAACCC
>XM_021612666.2
GCAGCAGGTGTGTTTAGCTCGCTGAAATAAATAAAGCCTACATTTTTCAATGATGCTCCACCCACAGGAAGTGCTACTTTCAACACACGCGACCTTCGATTCACTTCAAGTTACGTTTTCCAACAAGAACAAAGCATGGCGAATAAAGAGCCCGGTGGTTTGCTAGGGCAGTTGAGGCAGATGGCTAGCAGAATGGGCTCTGGTCCAAGGGGTGCAGGTCTTGGGTTCAAGCTGCTTATAGGGGCAGGAGCACTTGCCTATGGAGTCAAGGAAGCCACATACACAGTGGAAGGTGGTCAGAGAGCCATCATCTTCAACAGGATTGGTGGGATGCAGATGGACACGGTACTCGCTGAGGGGCTCCACATTAGGATACCATGGTTCCAGTACCCTGTCATCTATGACATAAGGGCGAGACCAAGAAAGATATCGTCCCTAACCGGAAGCAAAGACCTGCAGATGGTGAACATCGCCCTGCGTGTGCTGTCCCGTCCTGTGGCCTCCAACCTGCCTGCCATGTACCAGCAGCTCGGCAAGGATTATGATGAGAAGGTGCTGCCATCCATCGTCAATGAGGTGCTGAAGAGTGTGGTGGCCAAGTTCAACGCCTCGCAGCTCATCACACAGAGAGCTCAGGTGTCCCTGATGATTCGGCGGGAGCTCTTTGAACGGGCCAAGGACTTCAACATCATCCTGGACGATGTGGCCATCACCGAGTTGAGCTTCAGCAGGGAGTACACTGCCGCGGTGGAAGCAAAGCAAGTCGCCCAGCAGGAGGCACAGAGGGCCTTCTTCTATGTGGAGAAAGCCTTGCAGGACCAGAGGCAGAAGATCATCCAGGCTGAAGGCGAGGCAGAGGCTGCTAAAATGTTGGGTGAGGCGGTGACAAAGAACCCTGGCTACCTGAAACTCCGGAAGATCCGAGCAGCTCAGAACATTGCCAAGACGGTGGCGACATCGCAGAACAAGGTGTACCTGAGTGCAGATAACCTAGTGTTGAACCTCCAGGACAACACAAGCAACAGCTTCAGCAAtttatcGTTGCCGAGGTAAAGGGAAGCGTCCCTGAAGAGTATGCATTCCGTATCTTCAATTTGAGCCATCTCTACACATTATACCTCTTCGCCACACAGTGGTTTTCAACACTAGTCCTGGAAGACCCCTATGCGTACAGGTTTTTCTGTCTAGTCATTCCCTTGAATTATGTTATGTTCAATTTGTCTTTGAAATGGCTTTCCACATATGGTATCATGTTACAGTTGCCTGGCTTTAAATGTAATGATGTACAGATGAATAGAAACCGGATTGTGCCGGGGTACTCACAGACCAGCACAAAGGAGCACTTATTTGTTTCTACAAAGTGTATATCCTTGTCACAGTGCCTAACTCTTGGCCTGTATTCACAGAGCCTCAGAGTTGGTGTGCTGATATACAGTAGCATTAGTTTTAGATTATATAGAAAGAGAGcgctgatctaagatcaggtcCTCTTCTCCAATATGCTTTTTGGATGTGGGCCCTGGTTTGAGTTAACAACTCCATAGTGGCACGAAATCAACTAACTACACAGCAGGTGCAACCCAGTGGTTTCTTACACTCCAAGTGTCATCACCTCCCTGCCTTTATTATTTAGTTAAATTTCGATGTGACAACATCATGCATCGGAGAACCATCCATAGAGTCCTACTCTGACATTGCTAGGAGACAGGCTCCTCCGTACTTTTACTATATTTGTGTTCTGTAACACTCAACATAAGCCGTTTTTGTCCTGGATATACCTGTTGAAAGTGTCATGCCGGATCTTCGCGAAGTGTCGTGAATGAATACCAATGAATCTTAATGTCCTGTGTCACGAAACAATGTTACACCAGCGTAATACATCTAATTGTAATAAATGCTTATTTTCTTTGGttcatgtcccccccccccccccttttcatttacatttttttttcactgCATTTCAACCTATTTGTTCATCTTTGCTTGAGGAAAAAGGTCTTCATTACTGTGTTCGTAATCCTAACTAGAGGCTGAAGCACTCACATTGGGTttgaataaatacatgtttttggaTCACAACAGCGTCTACGTGATCTCTAACTTCTGACTTGATACAAAACTGTTTAATCCTTTATGCACAATAATATCAGACTGTCCTGTGCTGTCATGATACCATGCAACATTTGCAGCAGTGTGTTCCATAACCCTTATACTGGCTACTTTAACACATTTGGGTGTAGCAGATTCTAGGCTTGGGTGATATATTGGGTATTTTGAAATACTGATGGTATAAATTTCAATATCGTTTAAGCTGTTAGAGGAGTTGATCCTGGTTCGATAACACTGTCTTCCTTGAGCTCGTTAATAGTAGAATGTTAATATCTGAAGATGGCAGAAAGGCTTGTCTCTTTTTGGCAATGAcatggagtggaatgttagctaaaaagaCTGGTACCAGACAAGACATTCAATCCactcctggatcaagatccctgttgcctAAAATTGTGTGCACTTCCAGAAATACCGTTTACCCCAGTATTGTACAGAAATGCTATGACTGTATTAAATTCTGGATACTGCCCAACCC
>XM_036985509.1
CGCCGTAGAAGCAACCATGTTAGCCAGCTATGCAACCTAGCATTAGCTTTTGAATGATAGCTGACTTAACTAGCAAGATAGACAGTGGTTTGCGAGGTAGACCATTCATAGCTGAGACACCAATTCGTATAGATAGTAACTACATTATCCTGGTTTGCTAGGGCAGTTGAGGCAGATGGCTAGCAGAATGGGCTCTGGTCCAAGGGGTGCAGGTCTTGGGTTCAAGCTGCTTATAGGGGCAGGAGCACTTGCCTATGGAGTCAAGGAAGCCACATACACAGTGGAAGGTGGTCAGAGAGCCATCATCTTCAACAGGATTGGTGGGATGCAGATGGACACGGTACTCGCTGAGGGGCTCCACATTAGGATACCATGGTTCCAGTACCCTGTCATCTATGACATAAGGGCGAGACCAAGAAAGATATCGTCCCTAACCGGAAGCAAAGACCTGCAGATGGTGAACATCGCCCTGCGTGTGCTGTCCCGTCCTGTGGCCTCCAACCTGCCTGCCATGTACCAGCAGCTCGGCAAGGATTATGATGAGAAGGTGCTGCCATCCATCGTCAATGAGGTGCTGAAGAGTGTGGTGGCCAAGTTCAACGCCTCGCAGCTCATCACACAGAGAGCTCAGGTGTCCCTGATGATTCGGCGGGAGCTCTTTGAACGGGCCAAGGACTTCAACATCATCCTGGACGATGTGGCCATCACCGAGTTGAGCTTCAGCAGGGAGTACACTGCCGCGGTGGAAGCAAAGCAAGTCGCCCAGCAGGAGGCACAGAGGGCCTTCTTCTATGTGGAGAAAGCCTTGCAGGACCAGAGGCAGAAGATCATCCAGGCTGAAGGCGAGGCAGAGGCTGCTAAAATGTTGGGTGAGGCGGTGACAAAGAACCCTGGCTACCTGAAACTCCGGAAGATCCGAGCAGCTCAGAACATTGCCAAGACGGTGGCGACATCGCAGAACAAGGTGTACCTGAGTGCAGATAACCTAGTGTTGAACCTCCAGGACAACACAAGCAACAGCTTCAGCAATTTGAGCAGGTTGGGAGAAATAGGCTGGACGAGCCCTGAGATTATCAGCAAGGCTGTTCAAGAGACTCTTCCAGAGATTGAGGGAGAATTGAAGACCCCTGAGACAGCCAGTGTTCCTGCAATGCTTCCAGGGATTGAGGAACAACACTTCTCGAAGAGCCCTGATATTGTCAGCATGGCTGTTCCAAAGATTGAGGAGGAACATGAATTGAAGTTCCATGAGATGGTCGTTGTTCCAGAGACATGGAGTGAGGCGGGAGAATACCCGGTCCCCCATATTGCGGCGGCGGGTCCTGGGGACGTGGCGCAAAATGGCGAGGCTTGAACGTAGGtttatcGTTGCCGAGGTAAAGGGAAGCGTCCCTGAAGAGTATGCATTCCGTATCTTCAATTTGAGCCATCTCTACACATTATACCTCTTCGCCACACAGTGGTTTTCAACACTAGTCCTGGAAGACCCCTATGCGTACAGGTTTTTCTGTCTAGTCATTCCCTTGAATTATGTTATGTTCAATTTGTCTTTGAAATGGCTTTCCACATATGGTATCATGTTACAGTTGCCTGGCTTTAAATGTAATGATGTACAGATGAATAGAAACCGGATTGTGCCGGGGTACTCACAGACCAGCACAAAGGAGCACTTATTTGTTTCTACAAAGTGTATATCCTTGTCACAGTGCCTAACTCTTGGCCTGTATTCACAGAGCCTCAGAGTTGGTGTGCTGATATACAGTAGCATTAGTTTTAGATTATATAGAAAGAGAGcgctgatctaagatcaggtcCTCTTCTCCAATATGCTTTTTGGATGTGGGCCCTGGTTTGAGTTAACAACTCCATAGTGGCACGAAATCAACTAACTACACAGCAGGTGCAACCCAGTGGTTTCTTACACTCCAAGTGTCATCACCTCCCTGCCTTTATTATTTAGTTAAATTTCGATGTGACAACATCATGCATCGGAGAACCATCCATAGAGTCCTACTCTGACATTGCTAGGAGACAGGCTCCTCCGTACTTTTACTATATTTGTGTTCTGTAACACTCAACATAAGCCGTTTTTGTCCTGGATATACCTGTTGAAAGTGTCATGCCGGATCTTCGCGAAGTGTCGTGAATGAATACCAATGAATCTTAATGTCCTGTGTCACGAAACAATGTTACACCAGCGTAATACATCTAATTGTAATAAATGCTTATTTTCTTTGGttcatgtcccccccccccccccttttcatttacatttttttttcactgCATTTCAACCTATTTGTTCATCTTTGCTTGAGGAAAAAGGTCTTCATTACTGTGTTCGTAATCCTAACTAGAGGCTGAAGCACTCACATTGGGTttgaataaatacatgtttttggaTCACAACAGCGTCTACGTGATCTCTAACTTCTGACTTGATACAAAACTGTTTAATCCTTTATGCACAATAATATCAGACTGTCCTGTGCTGTCATGATACCATGCAACATTTGCAGCAGTGTGTTCCATAACCCTTATACTGGCTACTTTAACACATTTGGGTGTAGCAGATTCTAGGCTTGGGTGATATATTGGGTATTTTGAAATACTGATGGTATAAATTTCAATATCGTTTAAGCTGTTAGAGGAGTTGATCCTGGTTCGATAACACTGTCTTCCTTGAGCTCGTTAATAGTAGAATGTTAATATCTGAAGATGGCAGAAAGGCTTGTCTCTTTTTGGCAATGAcatggagtggaatgttagctaaaaagaCTGGTACCAGACAAGACATTCAATCCactcctggatcaagatccctgttgcctAAAATTGTGTGCACTTCCAGAAATACCGTTTACCCCAGTATTGTACAGAAATGCTATGACTGTATTAAATTCTGGATACTGCCCAACCC

Function

NR:

description
prohibitin-2-like isoform X1

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG:

id description
K17081 PHB2; prohibitin 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612665.2 False 2925 mRNA 0.46 11 46862561 46898724
XM_021612666.2 False 2593 mRNA 0.45 10 46862561 46898724
XM_036985509.1 True 2920 mRNA 0.46 11 46862807 46898724

Neighbor

gene id symbol gene type direction distance location
LOC118965520 NA coding upstream 148419 46704259 ~ 46714142 (+)
mfn1a LOC106568656 coding upstream 243395 46594403 ~ 46619166 (+)
si:ch1073-184j22.2 LOC106568795 coding upstream 349403 46510102 ~ 46513158 (+)
wdr33 wdr33 coding upstream 400435 46419920 ~ 46462126 (+)
proca proc coding upstream 455656 46399019 ~ 46406905 (+)
LOC110529968 LOC106568661 coding downstream 17421 46916145 ~ 46931901 (+)
LOC110529116 LOC106597230 coding downstream 55396 46954120 ~ 46956941 (+)
LOC110529969 LOC106568662 coding downstream 79355 46978079 ~ 47004330 (+)
LOC110529974 LOC106568665 coding downstream 241933 47140657 ~ 47194560 (+)
LOC110529975 LOC106568666 coding downstream 310827 47209551 ~ 47229335 (+)
G714030 NA non-coding upstream 2971 46859270 ~ 46859590 (+)
G713610 NA non-coding upstream 13812 46780817 ~ 46848749 (+)
G713514 NA non-coding upstream 207143 46636155 ~ 46655418 (+)
G713513 NA non-coding upstream 226500 46635629 ~ 46636061 (+)
G713512 NA non-coding upstream 227233 46635104 ~ 46635328 (+)
G714062 NA non-coding downstream 8706 46907430 ~ 46907812 (+)
G714103 NA non-coding downstream 63467 46962191 ~ 46962390 (+)
G714123 NA non-coding downstream 100554 46999278 ~ 47000089 (+)
G714069 NA non-coding downstream 104891 47003615 ~ 47003838 (+)
G714126 NA non-coding downstream 115183 47013907 ~ 47014115 (+)
G713574 NA other upstream 93315 46715915 ~ 46769246 (+)
G713405 NA other upstream 396334 46465398 ~ 46466227 (+)
G711912 NA other upstream 1068012 45793269 ~ 45794549 (+)
G711845 NA other upstream 1215184 45646857 ~ 45647377 (+)
G711021 NA other upstream 2413588 44448584 ~ 44448973 (+)
G716035 LOC106581475 other downstream 1639019 48537743 ~ 48544164 (+)
G716133 NA other downstream 1861619 48760343 ~ 48760740 (+)
G716862 NA other downstream 2434117 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 2647488 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 2954663 49853027 ~ 49854435 (+)

Expression


Co-expression Network