nebl (LOC106568663)


Basic Information

Item Value
gene id nebl
gene name LOC106568663
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47015885 ~ 47027075 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612671.2
AGTGAGTAAGTACCTAATGAAAGTACAGAATAGGCCATTTTTATTGGGGTATTTACATTTTTACAGTATACtatttatctttaaaaaaaaatgtataggcATGTAGTCTGACCTGAATCATTGTACATCATGAAATTGGGCAGGTTTCAAGTGTGATTCAGAGGTAGTCTAGGCAGGGGGGAAATGTTATTATgtccacctccctccctaccGAGGCAGTGCTTTGATAATCCTCCAAGAGTCAACACCCACACTGCTACATAGCCTGTGTTTACTGTGTTACTACTCATTTATTTTTTGAGTTTTGGAGTCTAATTTGGTGAATATGAATCCTCATTGTGCGCGCTGTGGGAAAATTGTTTATGCCACAGAGAAAGTCAACTGCCTGGATAAGTATTGGCACAAAGGATGTTTCCACTGTGAGGTCTGCAGGATGACTCTCAACATGAAGAACTACAAAGGCTATGAAAAGAAGCCCTACTGTAATTCGCACTATCCAAAGCAGTCATTCACCATTGTTGCAGATACTCCTGAGAACCTTCGACTGAGACAGCAAAGTGAGCTTCAGAGTCAGGTGAAGTACAAGAAAGACTTTGAGGAGAGCAAAGGACGAGGCTTCAAATTTGTGCTGGACACTCCTGAGCTGCAGAGACTACGACGAGCCCAGGATCAGATCAGTAATGTGAAATACCACAAGGACTTTGAGGTGATGGGCCCACAAGGAGTCACACATGGTGTTCATGCGCCTTACCTTGTGCGTGGCCAGCTGCGTCAAAACGTCCAGACAGAAAATACAGGGCACAAGGGTGTGCACCAGTACATAGTGGAGATGGCCCGGAGGCCTGGTGTCATCGTAGCTCCTGTGCTGCCAGGCGCGTACTACCCCAGTGGACACGTCCAGGGGCACAGCTACATGCACCAGACCAGTATGCACTCCTTACGGTCCCTGCAGAGTGTGTACAGAGCCCTCTACGATTACGTGAGCCAAGACACGGATGAGGTGTCGTTTCGGGACGGTGACATCATCCACAGCGTGCAGCCCATTGATGGGGGTTGGGTGTACGGCACGGTGCAAAGGACTGGCAGGTCTGGGATGCTCCCTGGTAACTACATAGAGGGTCTCCACTAAGGCTTACCAAACTAACTCAAGGCCTGGAACACATTCAAGTTGTACAACTGTTTTGATACAACAGTTTGTCTGCACAAAAATAATTAAAGGCCTCAATTCAATCAGATCGAGCGTAAAAACCCTCATTGGCCAACATCCGCATAGTGTATAACTGCGGTATAAAATGACAAATCGGTGAGCGGCTGCTTTTGTGTCACCAACCACTCCTTTTCTTATTATCCCTACCGCGATAGAAAATGTAGGCTATCGATTATAGAAATATTGACAGGGGctaatgcatgttttcatgtTCATTTTGATGGGTCGATTTATAGCCTATCAGTCTAGTCAAGGTGTAGATAGTAGAACATCACACATTCAAGTGTTTGAACTTGTAACATGATATAAAGTTGGGTGTGGTTTCATTGCATCAAATGTCAGTGTTCAGTGTCCAGCGCCtcgtggtctaaggcactgcatcacagtgctagctgtgccactagagattctgggttcaattccatggggcggtgcacaattggcccagcgtcgtccggattaggggaggATTTAGCCAGCAGGGATgctcttgtcccatcgcgcactagcgactcctgaggttggctgggcgcagtgcatgctgacacggtcgccaggtgtatggtgtttcctctgacacgttggtgcggctggtttccgggttaagtgggcattgtgtcaagaagcagtgcagcttggttgggttgtgtttcgcaggacgcatggctctcgaccttcgcctctcccgaatcTGTACAGGAGTTGcaacgatgagacaagactgtaactaccaattggataccatgaaattggggagaaaacggggtaaaaataacatttaaacaTATCAGCGTCCGCGATAAGGTAACACAAGGAGCCGCTTGTGGGTTTGACAGTTCTAACGCCACACCACCGCTCCGACACCACCAAAATGACCGCTATGCGGATGTTGGTTTCGCTAATGATAGAATCTAGCCCAACAGTAGTTGTACAACCTGAGTGTATACTGGGTCTGACTGAGAGCATTATGTAGATAAGATGCACCATGACACTCGAAGCCTCTGTATGGTGAGGATTTACATCAAAATATACAAGTGGTAATAGCAATTGAAATAATGTTTTTGGAAATATATGAACAAGTAAAGATTCAAATTCTGTACATGTTTAAAAATGAATGTAACTGTCATTTTTGTGTGCTTATAGTATATAACATGTTCTATTCACAGCAGTGTGTGCACTACAAAGTATGTTAACAATTTGAGTGTTCCATCTTCAAATCTAAAGTTGTAAACATGACAAAATTCCAGTACGTAATGTCAAGCTACTGTATGCAACCTGTCACTTGCACGTCTTCGATTCCATGTCTTCAATTCAAATGCAGGCAAAAGGTTTGCAGGCAAAAGGTTTgcagataaatgttttaaaaaaaggtaaataaatgtattaacatgaagtattttcttgtttttcttcTTAAATAAATGAAAGATGACTGGCTGCAATACA
>XR_002474465.2
AGTGAGTAAGTACCTAATGAAAGTACAGAATAGGCCATTTTTATTGGGGTATTTACATTTTTACAGTATACtatttatctttaaaaaaaaatgtataggcATGTAGTCTGACCTGAATCATTGTACATCATGAAATTGGGCAGGTTTCAAGTGTGATTCAGAGGTAGTCTAGGCAGGGGGGAAATGTTATTATgtccacctccctccctaccGAGGCAGTGCTTTGATAATCCTCCAAGAGTCAACACCCACACTGCTACATAGCCTGTGTTTACTGTGTTACTACTCATTTATTTTTTGAGTTTTGGAGTCTAATTTGGTGAATATGAATCCTCATTGTGCGCGCTGTGGGAAAATTGTTTATGCCACAGAGAAAGTCAACTGCCTGGATAAGTATTGGCACAAAGGATGTTTCCACTGTGAGGTCTGCAGGATGACTCTCAACATGAAGAACTACAAAGGCTATGAAAAGAAGCCCTACTGTAATTCGCACTATCCAAAGCAGTCATTCACCATTGTTGCAGATACTCCTGAGAACCTTCGACTGAGACAGCAAAGTGAGCTTCAGAGTCAGGTGAAGTACAAGAAAGACTTTGAGGAGAGCAAAGGACGAGGCTTCAAATTTGTGCTGGACACTCCTGAGCTGCAGAGACTACGACGAGCCCAGGATCAGATCAGTAATGTGAAATACCACAAGGACTTTGAGGTGATGGGCCCACAAGGAGTCACACATGGTGTTCATGCGCCTTACCTTGTGCGTGGCCAGCTGCGTCAAAACGTCCAGACAGAAAATACAGGGCACAAGGGTGTGCACCAGTACATAGTGGAGATGGCCCGGAGGCCTGGTGTCATCGTAGGGTGGAATCCCATTGagtccaaggtctcttttacaaggGAGCCCTTCAACCATACCACCTTTTTAAGTTGTTGTCTTGGGTTCATGATGAATCAcagtaacaaacaaacaaaatattcaAGTTTTCTTGATATTTGTAGCCGCTGCAGCAGCCAACAGTTAGATAGCCATCAATATTGGGTTAGTCTTAGCATGCTGCTGGATAATGGAGTCAGCCCCGTGTTTAGGCAACAACTGAACCAATAGTGTCTGTACTGTAACAGACTGTCTGCGGTGTGTCTTTGCAGCTCCTGTGCTGCCAGGCGCGTACTACCCCAGTGGACACGTCCAGGGGCACAGCTACATGCACCAGACCAGTATGCACTCCTTACGGTCCCTGCAGAGTGTGTACAGAGCCCTCTACGATTACGTGAGCCAAGACACGGATGAGGT

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K24420 LASP1; LIM and SH3 domain protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612671.2 False 2653 mRNA 0.44 7 47015885 47027075
XR_002474465.2 True 1288 mRNA 0.46 7 47017536 47027075
Loading

Neighbor

gene id symbol gene type direction distance location
pex5lb LOC106568657 coding downstream 212716 46651828 ~ 46803169 (-)
si:ch1073-184j22.1 LOC106568655 coding downstream 458994 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 552193 46462625 ~ 46463692 (-)
dusp28 LOC106568652 coding downstream 598306 46407733 ~ 46417579 (-)
LOC110529956 LOC106568794 coding downstream 620767 46388942 ~ 46395118 (-)
dnajc1 dnjc1 coding upstream 119 47027194 ~ 47035362 (-)
LOC110529973 LOC106568664 coding upstream 23998 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 203012 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 256664 47283739 ~ 47295308 (-)
LOC110529978 LOC106568670 coding upstream 271220 47298295 ~ 47303919 (-)
G714271 NA non-coding downstream 74 47015599 ~ 47015811 (-)
G714262 NA non-coding downstream 5616 47003967 ~ 47010269 (-)
G714266 LOC106568662 non-coding downstream 14200 47001045 ~ 47001685 (-)
G714265 NA non-coding downstream 15186 47000483 ~ 47000699 (-)
G714263 LOC106568662 non-coding downstream 17241 46998395 ~ 46998644 (-)
G714276 NA non-coding upstream 8952 47036027 ~ 47036317 (-)
G714279 NA non-coding upstream 17629 47044704 ~ 47045496 (-)
G714290 NA non-coding upstream 42501 47069576 ~ 47069788 (-)
G714296 NA non-coding upstream 48785 47075860 ~ 47076089 (-)
G714298 NA non-coding upstream 50686 47077761 ~ 47077967 (-)
crfb16 LOC106568648 other downstream 690204 46309732 ~ 46325685 (-)
G712814 NA other downstream 1557637 45457777 ~ 45458248 (-)
G711133 NA other downstream 2476381 44538793 ~ 44539504 (-)
G709454 NA other downstream 3844803 43170760 ~ 43171082 (-)
G709272 NA other downstream 4295186 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 151349 47178424 ~ 47178736 (-)
G715865 NA other upstream 1261867 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1515216 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 1732837 48759912 ~ 48761163 (-)

Expression

nebl(LOC106568663) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 40.
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nebl(LOC106568663) Expression in each Bioproject

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nebl(LOC106568663) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
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Co-expression Network