dnajc1 (dnjc1)


Basic Information

Item Value
gene id dnajc1
gene name dnjc1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47027194 ~ 47035362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612670.2
AAACCGGAAAAGGTAAAGAGCAGaggattgtgggaaatgtagCAAATTGTTAGCATATGCAGCAGCCAGTTGTAAGGGTAGTAGCTAGACACGTTAGCTGTATCACAGCagaatttatttatatatatttcgcGGTGCAATATTACCGCCAACATTGTCAAAGCCTCATAATGACCCCAGCTTCATTGGGCCTCTCGTTTATTCTTGCCGTCAGTATTTTTATTGCAAACCCAAGTCCCTCTCATGCTTGGGATTCAGACCTTGAGCTGTTCGACCTGGTGGAGGAAATTCAACAAAACTTTTACGAATTCCTGTCTGTTGAACAGGATGCCTCGTCAGTGGACATCAGAAAGGCCTATCGCAGGCTGTCGCTCACTTTGCATCCCGACAAGAACAAAGACGAGAATGCTGAAACCCAATTCAGACAGTTGGTGGCCATCTATGAAGTACTgaaagatgaagagaggagagagagGTATAATGATGTCCTGGTCAACGGGCTACCGGACTGGAGGCAGCCAGTGTTTTACTACAGGCGGGTGAGGAAGATGAGCAATGGGGAGCTGGGCTTCCTGCTCTTCCTCATCCTCACTGTGTGCCACTACGCAGTCATCTGGTCCATCTACCTGGAGAAGCAGCTGGATGAACTTCTGAGCAAGAAGaaaaaggagaagaaaaaaaagatgaGTAGCAAGAGTGCTGAAGAATCGCGGTTTGTTGGACAGGATAAAATTGAGAAGTCACATGACAAACCTCATTGGCAGGATATCCTGCCACTCAAGCTGAGCATCTGGCTGTATCTCTCTGTCAAGTCCCTGCCCCATGTCATCCAGGATGCCAAACAGTATTACGAAGATTATAAGGAGATGAaaatcagagagaaagaggaagcgGAAGCCATGGCACTGGAAGAACAGGAAGCTACAACAATAAAAGAGAAACGACCCAAAGTGAAGAAGCCGAAGTTTGAGTTCCCCGTTTACGAGCCTTCACTCAAGGTCGCAGACAGCGCATACTCACCAGTATACGACCAGGGAACGTCCATCGAGGAGATCGAAGACCAGATGGATGACTGGCTAGAGGATAAGAAGTCTCAGAAGAAAAAGGCACCTGAGTGGTCAGAAGAGGACATCACTCTTCTGACAAGGAGTATGGCCAAGTTCCCTGGGGGAACACCTGGTCGCTGGGAGAAGATCGCACACGAACTAGGAAGATCGGTGACAGATGTTACTGCAAAAGTCAAACAAGTTAAAGACGGTCAAACCAACACATCAGGGCTGGTGAAGCTCTCGGAGCTCAAGGCTCAGGGCAGCGCAGCACTCTCAGGAAAGGGATCCAAAGCTGGGGCCGGAGCTGTACCCGACAGTGTCATGACCCAGCGAGAACACCCGCAACCCCAGCCTCTGGCAGCAGCCACAGCAGAGTGGATGGAGCCCAGTGGAGGAGGGGATGAAGGAGAGGGCATCCaagcaggaggtgtcaggaggagaggcagaaagactgggggtggaggggtggggggcGAGGAGAAAGCCAAGGGGCGCAGACAGAGGGACTTCGACCCCACAGTTGCCATCGAGGACAGCGAAGAGGAGCAGAGTCCGCCCACCTCCTCGGTCCCACAACCCTCCAAGGAGAAGGCTGCGGCGACTGACGACATCTGGACCCAGAACCAGCAGAAGCTTCTGGAGCTGGCCCTGCAGCAGTACCCGCGAGGCACCACGGAACGCTGGGACAGGATTGCCAAGGTGGTGCCCGGGAAGAGCAAGGAGGAGTGTATGATACGTTACAAACTTTTGGCTGAGCTGGTGCTGAAAAGGAAGCAGGCCAAGAGCTGACTCCGCCAAGGACGGCCATCTTGAAATCACTTTCTGGCTCCTAGTCCCTTTTCCTAGCTACTATCCACTTCAATGTGATCTGAAAAGCCTGGATAGATGAAGGCAATATAGTGAAAAAATCCACATTGCATATTGTTGGGACATATTGCTTTTACCTGTCCAGTTCCTTCAGATCTGTGaacaggacagggagaggagcagggggaagGGCCATCCTCTCatgtctgtcatgtgccttagcTCCACCCAAAGCATGCCATCCAGCCTCTGAACTGCTATGTGAGGATTCAAAGCACCAACAAAAAACGTCTATACCTTTTTTTGTACTTCAATATGTTTTGACTTCTGCTTTGCGCTGTCATTTGAAATCACACATGTACTGAATATAACTTCTTTGAGATGAGGAAATaaactgttttatttattta

Function

NR:

description
dnaJ homolog subfamily C member 1-like

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0003682 chromatin binding molecular_function

KEGG:

id description
K09521 DNAJC1; DnaJ homolog subfamily C member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612670.2 True 2266 mRNA 0.50 12 47027194 47035362
Loading

Neighbor

gene id symbol gene type direction distance location
nebl LOC106568663 coding downstream 119 47015885 ~ 47027075 (-)
pex5lb LOC106568657 coding downstream 224025 46651828 ~ 46803169 (-)
si:ch1073-184j22.1 LOC106568655 coding downstream 470303 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 563502 46462625 ~ 46463692 (-)
dusp28 LOC106568652 coding downstream 609615 46407733 ~ 46417579 (-)
LOC110529973 LOC106568664 coding upstream 15711 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 194725 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 248377 47283739 ~ 47295308 (-)
LOC110529978 LOC106568670 coding upstream 262933 47298295 ~ 47303919 (-)
LOC110529981 LOC106568675 coding upstream 362421 47397783 ~ 47439942 (-)
G714271 NA non-coding downstream 11383 47015599 ~ 47015811 (-)
G714262 NA non-coding downstream 16925 47003967 ~ 47010269 (-)
G714266 LOC106568662 non-coding downstream 25509 47001045 ~ 47001685 (-)
G714265 NA non-coding downstream 26495 47000483 ~ 47000699 (-)
G714263 LOC106568662 non-coding downstream 28550 46998395 ~ 46998644 (-)
G714276 NA non-coding upstream 665 47036027 ~ 47036317 (-)
G714279 NA non-coding upstream 9342 47044704 ~ 47045496 (-)
G714290 NA non-coding upstream 34214 47069576 ~ 47069788 (-)
G714296 NA non-coding upstream 40498 47075860 ~ 47076089 (-)
G714298 NA non-coding upstream 42399 47077761 ~ 47077967 (-)
crfb16 LOC106568648 other downstream 701513 46309732 ~ 46325685 (-)
G712814 NA other downstream 1568946 45457777 ~ 45458248 (-)
G711133 NA other downstream 2487690 44538793 ~ 44539504 (-)
G709454 NA other downstream 3856112 43170760 ~ 43171082 (-)
G709272 NA other downstream 4306495 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 143062 47178424 ~ 47178736 (-)
G715865 NA other upstream 1253580 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1506929 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 1724550 48759912 ~ 48761163 (-)

Expression

dnajc1(dnjc1) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 80.
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dnajc1(dnjc1) Expression in each Bioproject

Bar chart with 21 bars.
dnajc1(dnjc1) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network