Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529976 |
| gene name | LOC106568668 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 47230087 ~ 47260852 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021612689.2 | False | 6719 | mRNA | 0.50 | 12 | 47230087 | 47260839 |
| XM_021612686.2 | False | 6791 | mRNA | 0.50 | 12 | 47230087 | 47260840 |
| XM_021612688.2 | False | 6787 | mRNA | 0.50 | 12 | 47230087 | 47260840 |
| XM_021612685.2 | False | 6810 | mRNA | 0.50 | 12 | 47230087 | 47260844 |
| XM_021612687.2 | False | 6806 | mRNA | 0.50 | 12 | 47230087 | 47260844 |
| XM_036985515.1 | False | 7314 | mRNA | 0.49 | 11 | 47230087 | 47260844 |
| XM_021612690.2 | False | 6728 | mRNA | 0.50 | 12 | 47230087 | 47260852 |
| TU812329 | True | 3364 | lncRNA | 0.43 | 1 | 47230125 | 47233488 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529973 | LOC106568664 | coding | downstream | 162114 | 47051073 ~ 47067973 (-) |
| dnajc1 | dnjc1 | coding | downstream | 194725 | 47027194 ~ 47035362 (-) |
| nebl | LOC106568663 | coding | downstream | 203012 | 47015885 ~ 47027075 (-) |
| pex5lb | LOC106568657 | coding | downstream | 426918 | 46651828 ~ 46803169 (-) |
| si:ch1073-184j22.1 | LOC106568655 | coding | downstream | 673196 | 46527650 ~ 46556891 (-) |
| LOC110529977 | LOC106568669 | coding | upstream | 22887 | 47283739 ~ 47295308 (-) |
| LOC110529978 | LOC106568670 | coding | upstream | 37443 | 47298295 ~ 47303919 (-) |
| LOC110529981 | LOC106568675 | coding | upstream | 136931 | 47397783 ~ 47439942 (-) |
| LOC110529117 | NA | coding | upstream | 394200 | 47655052 ~ 47656068 (-) |
| LOC110529987 | LOC106568679 | coding | upstream | 465938 | 47726790 ~ 47894176 (-) |
| G714689 | NA | non-coding | downstream | 794 | 47228767 ~ 47229293 (-) |
| G714440 | LOC106562530 | non-coding | downstream | 21742 | 47207979 ~ 47208345 (-) |
| G714435 | NA | non-coding | downstream | 27206 | 47202652 ~ 47202881 (-) |
| G714430 | NA | non-coding | downstream | 31743 | 47197656 ~ 47198344 (-) |
| G714429 | NA | non-coding | downstream | 33559 | 47193357 ~ 47196528 (-) |
| G714764 | NA | non-coding | upstream | 91341 | 47352193 ~ 47388487 (-) |
| G714816 | NA | non-coding | upstream | 190605 | 47451457 ~ 47451848 (-) |
| G714823 | NA | non-coding | upstream | 204973 | 47465825 ~ 47466150 (-) |
| G714855 | NA | non-coding | upstream | 260928 | 47521780 ~ 47522040 (-) |
| G714876 | NA | non-coding | upstream | 272147 | 47532999 ~ 47533347 (-) |
| G714425 | LOC106568665 | other | downstream | 51351 | 47178424 ~ 47178736 (-) |
| crfb16 | LOC106568648 | other | downstream | 904406 | 46309732 ~ 46325685 (-) |
| G712814 | NA | other | downstream | 1771839 | 45457777 ~ 45458248 (-) |
| G711133 | NA | other | downstream | 2690583 | 44538793 ~ 44539504 (-) |
| G715865 | NA | other | upstream | 1028090 | 48288942 ~ 48289581 (-) |
| dlg1l | LOC106568684 | other | upstream | 1281439 | 48356004 ~ 48616588 (-) |
| G716463 | LOC106591423 | other | upstream | 1499060 | 48759912 ~ 48761163 (-) |
| G716480 | tnk2 | other | upstream | 1521269 | 48782121 ~ 48782515 (-) |
| G716488 | NA | other | upstream | 1527669 | 48788521 ~ 48788962 (-) |
