XLOC_025796 (CU019632.1)


Basic Information

Item Value
gene id XLOC_025796
gene name CU019632.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 56619195 ~ 56622872 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050673
TAATACCGTAAATATGACGTAAAATTCAAAGAGCTCACAGCATTTAAAAAGCCCACTGATTCTTGATCTTATTAACTACAAAGGTGACAGCTGAAATTCACTTTTTGTTTTTCGAGTTGACTAGTTAAGaTACTGAAATGTTTCTTCAACACATGATCTCTTTGTTGCTCCTCATGCGTTCAAGTCCGATTGTGTTGACAGACCGGTGTGAAGGTAGCTATCGATGTCTGGCTAATGACTTACTTGCTAAGAATATGAAAATTGCACCGCAGGACACATGTTCTGTTCTAGTAACAGTTGCTTCAATGGAATATGAGACATTGTCTTTTGATACAAAAGAACAGCAGATGAGTTGCCGTGTCAAGGTAAACATGGTGAGTAgatcaactttttttatttgactatttttgtgtttgttggCTCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117771

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050673 True 424 lncRNA 0.37 4 56619195 56622872

Neighbor

gene id symbol gene type direction distance location
XLOC_025795 rac1b coding upstream 24910 56574623 ~ 56594285 (+)
XLOC_025794 cacng5b coding upstream 225177 56366395 ~ 56394018 (+)
XLOC_025793 NA coding upstream 258545 56358682 ~ 56360650 (+)
XLOC_025792 prkcab coding upstream 277076 56163276 ~ 56342119 (+)
XLOC_025791 FP326652.1 coding upstream 511286 56099256 ~ 56107909 (+)
XLOC_025797 CR759836.1 coding downstream 22838 56645710 ~ 56685946 (+)
XLOC_025798 rnf213a coding downstream 76315 56699187 ~ 56813923 (+)
XLOC_025799 NA coding downstream 198827 56821699 ~ 56822203 (+)
XLOC_025800 amn coding downstream 253408 56876280 ~ 56877918 (+)
XLOC_025801 otop2 coding downstream 282231 56905103 ~ 56918442 (+)
XLOC_025429 BX649540.1 misc upstream 26370159 30248739 ~ 30249036 (+)
XLOC_025790 NA non-coding upstream 964931 55646873 ~ 55654264 (+)
XLOC_025789 NA non-coding upstream 1130954 55482120 ~ 55488241 (+)
XLOC_025788 NA non-coding upstream 1231538 55386215 ~ 55387657 (+)
XLOC_025802 NA non-coding downstream 327083 56949955 ~ 56957558 (+)
XLOC_025806 NA non-coding downstream 803288 57426160 ~ 57480996 (+)
XLOC_025807 NA non-coding downstream 811389 57434261 ~ 57436304 (+)
XLOC_025808 CT573423.1 non-coding downstream 1013502 57636374 ~ 57641090 (+)

Expression


Co-expression Network