LOC110529117


Basic Information

Item Value
gene id LOC110529117
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47655052 ~ 47656068 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002474329.2
ataggctgtcattctaaataagaatgtgttcttaactgacttgcctaattaaataaaggttgaaaaaaatctaaatgtcatgttttttctttgtcatgtcTCTGGAAGAACAATCCGCATAACGCCTGTGTACTGGATCTGATGGTTAGTCAGCTGAGATGGCAGATTTTGAAGATTCAGCTGCAAATCTGCATTGGACTGAAAGAGTGGAATAAGCCGTCGGACACCCCAGACAAGAAAGAACGGGGCATCAAAAAGTGAAGGCGGTCTTGCCAGAGACAGGATGTGGTCAGTCGGTCAAAAGAAATCTGCTGAGGTGATGCAGCAACTTGCGAAGGCAACTGAAGACATGATGTCTGATGTGGAGACAGACCCAGAGGATACTGATGCATTTTTCATAACCTCCCCACCATGCCTCTCCCCTGAGTTTGAGGACCTGATTGTGTCAGCAGACCGGATAAAAGGCCAAGCGTGCTTATGGGGAGAAAAGGCTCCTTCAGAACAAAAACCAGAGCAACCATCCACGTCCaccgcagccctatccagaacaTCTGATTGTGCAATAGACCACAGACAATCACCTGCAAAGGTCCTCTGCACCCACATTACTAAGAAATTGGCATAGTTCAAGCATACCatcacagttgtgaagagggcacgacagcacCTCTTTTccgtcaggaggctgaaaagatttgccatgggccctcagatcctcaaagttcgacagctgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002474329.2 True 735 mRNA 0.46 3 47655052 47656068

Neighbor

gene id symbol gene type direction distance location
LOC110529981 LOC106568675 coding downstream 215110 47397783 ~ 47439942 (-)
LOC110529978 LOC106568670 coding downstream 351133 47298295 ~ 47303919 (-)
LOC110529977 LOC106568669 coding downstream 359744 47283739 ~ 47295308 (-)
LOC110529976 LOC106568668 coding downstream 394200 47230087 ~ 47260852 (-)
LOC110529973 LOC106568664 coding downstream 587079 47051073 ~ 47067973 (-)
LOC110529987 LOC106568679 coding upstream 70722 47726790 ~ 47894176 (-)
LOC110529989 LOC106568683 coding upstream 673616 48329684 ~ 48343010 (-)
dlg1l LOC106568684 coding upstream 699936 48356004 ~ 48616588 (-)
LOC118965521 NA coding upstream 875454 48531522 ~ 48536626 (-)
LOC110529994 LOC106568693 coding upstream 1465981 49122049 ~ 49140712 (-)
G714876 NA non-coding downstream 121705 47532999 ~ 47533347 (-)
G714855 NA non-coding downstream 133012 47521780 ~ 47522040 (-)
G714823 NA non-coding downstream 188902 47465825 ~ 47466150 (-)
G714816 NA non-coding downstream 203204 47451457 ~ 47451848 (-)
G714764 NA non-coding downstream 266565 47352193 ~ 47388487 (-)
G715048 NA non-coding upstream 11901 47667969 ~ 47673891 (-)
G715079 NA non-coding upstream 41519 47697587 ~ 47697872 (-)
G715083 NA non-coding upstream 48151 47704219 ~ 47704470 (-)
G715087 NA non-coding upstream 51285 47707353 ~ 47707584 (-)
G715088 NA non-coding upstream 51579 47707647 ~ 47707953 (-)
G714425 LOC106568665 other downstream 476316 47178424 ~ 47178736 (-)
crfb16 LOC106568648 other downstream 1329371 46309732 ~ 46325685 (-)
G712814 NA other downstream 2196804 45457777 ~ 45458248 (-)
G711133 NA other downstream 3115548 44538793 ~ 44539504 (-)
G715865 NA other upstream 632874 48288942 ~ 48289581 (-)
G716463 LOC106591423 other upstream 1103844 48759912 ~ 48761163 (-)
G716480 tnk2 other upstream 1126053 48782121 ~ 48782515 (-)
G716488 NA other upstream 1132453 48788521 ~ 48788962 (-)

Expression


Co-expression Network