si:dkey-181m9.8 (LOC106568680)


Basic Information

Item Value
gene id si:dkey-181m9.8
gene name LOC106568680
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48145790 ~ 48162546 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612704.2
aactgcctcatcgaagaagaagatgaagatgaGCCCCGAGTAGGAATTCCgcgttggatgaccgttcaaatcgATTTTTCCATGTTAGACACTCGATTTTTTTTCTCAGTTCCCAGTTGTTGGAACGGACTGATGTCGAGCTCTCCAAATTCCCCGTTTCGAGTTCCTAGTGTATTTCATCGCAGCTGTCGGGAATGTCAGATGTTGTCATAGCTAGTTTTGAATGTTGATTCATAATTCCACATAAGATTGAAAGGTTAAATTATAAAAAATGCCGAGGGTCCCAGCAGTCCTTGAATATGAAACACTGACCGAGTGTAAATACAGCTTCCCTGTTGAGGTTGTCAGTGATATCAAGAATGTTACAGCGACTTATGGAGACCTGCGTATGTATGTGGACTTCTACTGTTTCCCCAATAAGGAAAAGAAGAAGTTAGTTTATTTGGCTGGTACTATTCCAGTTCCACACGACGCAGGTAACACATATAATATCCCAGTGTGCATCTGGCTCCACGAGACTCACCCCCAGAGCCGGCCACGGTGCTACGTGTGtccctccatctccatgttgATCAACCCCAGGTGCCCATATGTTGAGGCCAGTGGGCAGGTGCTCCTCGACTGCCTCAACAACTGGAAGAGCGGGCTGGCCAACCTGTCATTGCTCGTCTCAGAAATGAGGTCTGCATTTCAAAAGGAAACGCCCCTCTTTGCCATGCACCCAATCAGAGTTCAGATGCTACCTACTGCAGCACACTCCAGTGCATATGCAGAGTCTTCGGACCATGGCAGCTGGCCTCAACCAAGCAGCTCTACCCCAAGAGCCAGGCGCTCCTCAATGTCCCCCACGCCACTACCTAGAGAAATAGTTCCGCCCAAGAGTTTAAAGTCCAGCCAATCGGGGCCTCTCAGAGAGTCTGTGACTGGTGTGAGGCGGTCCTACACAGAGGAGCTACTGGATATGGGGATAAACTTTGGAGTGCCAGGTGGAGTCCAGTTTCCATTCTCCTCCACCAACCCcttcatcactactgcctctgCTCCAAATAACACTCCTGTTAGTTCTGAGGACATGAACAACCTATTCAAGAGCCTACAGCTGGAAAATGTTGTCAATGTGTACCAGCTTGGTACTAAAGAAAGAGGACAGATGCAAGGCGATGGAGGTGATCGAGGTGGTGGTGACTACCCCCCAATCCCCACTGCAGTCACGCCCCTAGTGGACAACCAGCATCGTATCCTGGTGAGCCAGCTGCCACCGGACCAGTCCCCCAGCCGTGTGAAGAACAAGCTCACCCTCTACTTCCAGCGCAGGAGCAACGGTGGGGGAGAGGTGCTGGATGTGACCTACCCTTACCCCCCGACCCAGCACGACCAGGCCCTGGTCAGCTTCCGCAGTCCCAGAGATGCAGAGCAGGTGCTCTTACAGGCAGACCGAATCTTTACTGTGAATGAGCGGCCTTTCCGTATACAGCTCAAGAGGGTCAACAGTGCTCAGATTACGGTGCCGCCCAGCGTCTCCGGCGACAAGGCGGCCATCTTCCATAGCCTGCTGTCACTTGAGGGGCGGAGCTTCAGCCAGGCCGACGTGGAGGAGGCGGTACAGTCGTGCCGGGACCTTCCCTCGGCCCTCAAGTACCTGTCCCATGAATGCCCCATCTGCCGCGAGCAGGTGTCCTTCAGCAAGATCATCACTATGACCCATTGCCTGTGTGCTTTCTGCGAGAGCTGCTTCAAGGCCTACTTCTCTCAGGCCATCAAGGAGAAGAGCATCGTCCATGTGGTGTGTCCCATGTGTGGCCAACCCGACGTGCGTCAGAGCCAGGGAGGCGTGGAGGAGGCCTTGGACTACTTCAGCCTTCTGGACACACAGATCAGGCACTACCTAGATCCTCAGATCCACGAGTTgttccagaggaagctgagagACCGAGCCTTGCAGGAGATGCCTAACTTCCGCTGGTGTGCCCACTGCTCCTTTGGCCTTCTACACGAGGCTGACCAGCTGAGAATGGACTGTCCTAGTTGTAGGAAGAGCACCTGCTCCCAATGCAAGACTGCATGGGCTCCACAACACCAGGGTCTTTCCTGTGAGAAGTTCAGAGAGTGGCAACTCTACAATAACCCAGAGTACCAGACCGCAAAACTGGAGAATCTCCTCAGCAGGAATAaaatagAATGTCCAAAATGCAAGTTTGTGTTCTACCTTTCCAAGGGAGGCTGTCTCCATTTCAAATGCACCCAATGCCAGCACGAGTTCTGTGGCGGCTGTAATAGGCCCTTCAAATTAGGCGTGGGGTGTGACTTCTCAGCTGAGTGTGGGTCCAAGGGGTTACACGCCCACCACCCCAGGGACTGCCTGTACCACCTGAGGGACTGGAACGTGCCCAGACTACACAGGCTGCTTCAGCTTTACGGAGTGTCCCTCGCGGGCATGGTCAAATCCAAAGTGGGCTCTACAGGAACAAACTCACAAGGTGTGTGTGCAGTACTGGAGCacagagagatgggtggagacgGGCCTTGTGGTCTACCAACTCTCCCAGAGTACAGTGGCTACTGCATCTTACACTATAAAGAGTGTCTAGTGGAGCTGATTAACCGGAGTCATGCGGATCCAGCCGTTCTGTTCGATGTCGCCGAGATGTTGGCCGAGTTACAGCGGTGGCACATTCCTGTTCCACAGAAGAACCTTCAGGATCCTGAGGCACTCTATGTACAGCACCTTAGACAGACCCTGACTAGGAAGGTTAGCCTGAGGGACAACAAGCTACCCCCTGTGAAGGTGAAAGATGACCTTTGCCCCCTACCCTCGTCGAGCGCTGCGGGACCACGCTGGTCTTCTGCTCAGAGAAACACACCAACGCGCTTCCATGACGACTCCCAATTGCTGCTCTTGCTCAACGACTAAGGCCATGTAAAATACTTGGCCTCACCTGGGCTTGGTTCCTTAGGGCACATGATGGCAAATGCTTTTACATGTTTTGCTATggagaaaaaaatgtgtttcttaATGGATAAGGCCAGGTTCCTTGCGTCAGtccgttttcttccgtttggtgcctagtGAATACCACCCAGGCTTGTGTTAAGTGGggagaaaacattttaaaattaaGTGAAACTGGGGAAGGGACTACCCGGTCTTGTCCAATGAGAGAAACACATATTTGTTTTCCGTtgcaattttttgttgttgcgtgTCCTAATAAACATGATCTAGGGGTAATATTTAACTTCAACCCTCTGTTATAATGGCTATGTAACACTGGCCTAATAATGACATAGAAATAGCACCATAAACAGTCCATAGAAGGCAGGGACAAGGTCAATTGGTCCTTTGAGGAGCTGTGTTGCACACTGCTGCTCTAGATCTAGCTATGCTGTGGCCAGGATTCAATCAAAAGTGCATTGAGATCACGGTAAACGCAGTGGATGTCAACTCGAGCGTAAAGTGCAGTGCACTTTTGATTTGAAATAACTACCGGATCTGGTACATTAAGattttgtttgttttcatgtAATTGTAATTTGTTTGACGTTTATTCTTAATAAACATGTagatacaaaaatataaacgcaa
>XM_021612706.2
aactgcctcatcgaagaagaagatgaagatgaGCCCCGAGTAGGAATTCCgcgttggatgaccgttcaaatcgATTTTTCCATGTTAGACACTCGATTTTTTTTCTCAGTTCCCAGTTGTTGGAACGGACTGATGTCGAGCTCTCCAAATTCCCCGTTTCGAGTTCCTAGTGTATTTCATCGCAGCTGTCGGGAATGTCAGATGTTGTCATAGCTAGTTTTGAATGTTGATTCATAATTCCACATAAGATTGAAAGGTTAAATTATAAAAAATGCCGAGGGTCCCAGCAGTCCTTGAATATGAAACACTGACCGAGTGTAAATACAGCTTCCCTGTTGAGGTTGTCAGTGATATCAAGAATGTTACAGCGACTTATGGAGACCTGCGTATGTATGTGGACTTCTACTGTTTCCCCAATAAGGAAAAGAAGAAGTTAGTTTATTTGGCTGGTACTATTCCAGTTCCACACGACGGTAACACATATAATATCCCAGTGTGCATCTGGCTCCACGAGACTCACCCCCAGAGCCGGCCACGGTGCTACGTGTGtccctccatctccatgttgATCAACCCCAGGTGCCCATATGTTGAGGCCAGTGGGCAGGTGCTCCTCGACTGCCTCAACAACTGGAAGAGCGGGCTGGCCAACCTGTCATTGCTCGTCTCAGAAATGAGGTCTGCATTTCAAAAGGAAACGCCCCTCTTTGCCATGCACCCAATCAGAGTTCAGATGCTACCTACTGCAGCACACTCCAGTGCATATGCAGAGTCTTCGGACCATGGCAGCTGGCCTCAACCAAGCAGCTCTACCCCAAGAGCCAGGCGCTCCTCAATGTCCCCCACGCCACTACCTAGAGAAATAGTTCCGCCCAAGAGTTTAAAGTCCAGCCAATCGGGGCCTCTCAGAGAGTCTGTGACTGGTGTGAGGCGGTCCTACACAGAGGAGCTACTGGATATGGGGATAAACTTTGGAGTGCCAGGTGGAGTCCAGTTTCCATTCTCCTCCACCAACCCcttcatcactactgcctctgCTCCAAATAACACTCCTGTTAGTTCTGAGGACATGAACAACCTATTCAAGAGCCTACAGCTGGAAAATGTTGTCAATGTGTACCAGCTTGGTACTAAAGAAAGAGGACAGATGCAAGGCGATGGAGGTGATCGAGGTGGTGGTGACTACCCCCCAATCCCCACTGCAGTCACGCCCCTAGTGGACAACCAGCATCGTATCCTGGTGAGCCAGCTGCCACCGGACCAGTCCCCCAGCCGTGTGAAGAACAAGCTCACCCTCTACTTCCAGCGCAGGAGCAACGGTGGGGGAGAGGTGCTGGATGTGACCTACCCTTACCCCCCGACCCAGCACGACCAGGCCCTGGTCAGCTTCCGCAGTCCCAGAGATGCAGAGCAGGTGCTCTTACAGGCAGACCGAATCTTTACTGTGAATGAGCGGCCTTTCCGTATACAGCTCAAGAGGGTCAACAGTGCTCAGATTACGGTGCCGCCCAGCGTCTCCGGCGACAAGGCGGCCATCTTCCATAGCCTGCTGTCACTTGAGGGGCGGAGCTTCAGCCAGGCCGACGTGGAGGAGGCGGTACAGTCGTGCCGGGACCTTCCCTCGGCCCTCAAGTACCTGTCCCATGAATGCCCCATCTGCCGCGAGCAGGTGTCCTTCAGCAAGATCATCACTATGACCCATTGCCTGTGTGCTTTCTGCGAGAGCTGCTTCAAGGCCTACTTCTCTCAGGCCATCAAGGAGAAGAGCATCGTCCATGTGGTGTGTCCCATGTGTGGCCAACCCGACGTGCGTCAGAGCCAGGGAGGCGTGGAGGAGGCCTTGGACTACTTCAGCCTTCTGGACACACAGATCAGGCACTACCTAGATCCTCAGATCCACGAGTTgttccagaggaagctgagagACCGAGCCTTGCAGGAGATGCCTAACTTCCGCTGGTGTGCCCACTGCTCCTTTGGCCTTCTACACGAGGCTGACCAGCTGAGAATGGACTGTCCTAGTTGTAGGAAGAGCACCTGCTCCCAATGCAAGACTGCATGGGCTCCACAACACCAGGGTCTTTCCTGTGAGAAGTTCAGAGAGTGGCAACTCTACAATAACCCAGAGTACCAGACCGCAAAACTGGAGAATCTCCTCAGCAGGAATAaaatagAATGTCCAAAATGCAAGTTTGTGTTCTACCTTTCCAAGGGAGGCTGTCTCCATTTCAAATGCACCCAATGCCAGCACGAGTTCTGTGGCGGCTGTAATAGGCCCTTCAAATTAGGCGTGGGGTGTGACTTCTCAGCTGAGTGTGGGTCCAAGGGGTTACACGCCCACCACCCCAGGGACTGCCTGTACCACCTGAGGGACTGGAACGTGCCCAGACTACACAGGCTGCTTCAGCTTTACGGAGTGTCCCTCGCGGGCATGGTCAAATCCAAAGTGGGCTCTACAGGAACAAACTCACAAGGTGTGTGTGCAGTACTGGAGCacagagagatgggtggagacgGGCCTTGTGGTCTACCAACTCTCCCAGAGTACAGTGGCTACTGCATCTTACACTATAAAGAGTGTCTAGTGGAGCTGATTAACCGGAGTCATGCGGATCCAGCCGTTCTGTTCGATGTCGCCGAGATGTTGGCCGAGTTACAGCGGTGGCACATTCCTGTTCCACAGAAGAACCTTCAGGATCCTGAGGCACTCTATGTACAGCACCTTAGACAGACCCTGACTAGGAAGGTTAGCCTGAGGGACAACAAGCTACCCCCTGTGAAGGTGAAAGATGACCTTTGCCCCCTACCCTCGTCGAGCGCTGCGGGACCACGCTGGTCTTCTGCTCAGAGAAACACACCAACGCGCTTCCATGACGACTCCCAATTGCTGCTCTTGCTCAACGACTAAGGCCATGTAAAATACTTGGCCTCACCTGGGCTTGGTTCCTTAGGGCACATGATGGCAAATGCTTTTACATGTTTTGCTATggagaaaaaaatgtgtttcttaATGGATAAGGCCAGGTTCCTTGCGTCAGtccgttttcttccgtttggtgcctagtGAATACCACCCAGGCTTGTGTTAAGTGGggagaaaacattttaaaattaaGTGAAACTGGGGAAGGGACTACCCGGTCTTGTCCAATGAGAGAAACACATATTTGTTTTCCGTtgcaattttttgttgttgcgtgTCCTAATAAACATGATCTAGGGGTAATATTTAACTTCAACCCTCTGTTATAATGGCTATGTAACACTGGCCTAATAATGACATAGAAATAGCACCATAAACAGTCCATAGAAGGCAGGGACAAGGTCAATTGGTCCTTTGAGGAGCTGTGTTGCACACTGCTGCTCTAGATCTAGCTATGCTGTGGCCAGGATTCAATCAAAAGTGCATTGAGATCACGGTAAACGCAGTGGATGTCAACTCGAGCGTAAAGTGCAGTGCACTTTTGATTTGAAATAACTACCGGATCTGGTACATTAAGattttgtttgttttcatgtAATTGTAATTTGTTTGACGTTTATTCTTAATAAACATGTagatacaaaaatataaacgcaa

Function

NR:

description
uncharacterized protein LOC110529988 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612704.2 False 3583 mRNA 0.51 21 48145790 48162546
XM_021612706.2 True 3580 mRNA 0.51 21 48145790 48162546

Neighbor

gene id symbol gene type direction distance location
LOC110529986 LOC106568678 coding upstream 639556 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 693254 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 764816 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 847509 47296663 ~ 47298281 (+)
LOC110529975 LOC106568666 coding upstream 916455 47209551 ~ 47229335 (+)
tnk2b tnk2 coding downstream 516267 48678813 ~ 48806257 (+)
LOC110530923 LOC106568690 coding downstream 740391 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 955181 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 985421 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 1044453 49206999 ~ 49209154 (+)
G715608 NA non-coding upstream 44152 48100413 ~ 48101638 (+)
G715606 NA non-coding upstream 45620 48099883 ~ 48100170 (+)
G715604 NA non-coding upstream 47538 48097678 ~ 48098252 (+)
G715582 NA non-coding upstream 70709 48074734 ~ 48075081 (+)
G715579 NA non-coding upstream 71891 48073547 ~ 48073899 (+)
G715679 NA non-coding downstream 3194 48165740 ~ 48168950 (+)
G715690 NA non-coding downstream 14451 48176997 ~ 48177229 (+)
G715691 NA non-coding downstream 16121 48178667 ~ 48178881 (+)
G715692 NA non-coding downstream 17770 48180316 ~ 48180581 (+)
G715745 NA non-coding downstream 36896 48199442 ~ 48199675 (+)
G713574 NA other upstream 1376544 46715915 ~ 46769246 (+)
G713405 NA other upstream 1679563 46465398 ~ 46466227 (+)
G711912 NA other upstream 2351241 45793269 ~ 45794549 (+)
G711845 NA other upstream 2498413 45646857 ~ 45647377 (+)
G711021 NA other upstream 3696817 44448584 ~ 44448973 (+)
G716035 LOC106581475 other downstream 375197 48537743 ~ 48544164 (+)
G716133 NA other downstream 597797 48760343 ~ 48760740 (+)
G716862 NA other downstream 1170295 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 1383666 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 1690841 49853027 ~ 49854435 (+)

Expression


Co-expression Network