Gene
RNA
| Item | Value |
|---|---|
| gene id | dlg1l |
| gene name | LOC106568684 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 48356004 ~ 48616588 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| discs large homolog 1-like protein isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036985531.1 | False | 5527 | mRNA | 0.44 | 17 | 48356004 | 48429216 |
| XM_036985532.1 | False | 5531 | mRNA | 0.44 | 17 | 48356004 | 48429216 |
| XM_021612717.2 | False | 5724 | mRNA | 0.48 | 22 | 48356004 | 48486048 |
| XM_021612729.2 | False | 5588 | mRNA | 0.48 | 21 | 48356004 | 48515295 |
| XM_021612711.2 | False | 5921 | mRNA | 0.48 | 26 | 48356004 | 48616542 |
| XM_021612714.2 | False | 5858 | mRNA | 0.48 | 26 | 48356004 | 48616542 |
| XM_021612718.2 | False | 5816 | mRNA | 0.48 | 25 | 48356004 | 48616542 |
| XM_021612719.2 | False | 5774 | mRNA | 0.47 | 25 | 48356004 | 48616542 |
| XM_021612721.2 | False | 5771 | mRNA | 0.47 | 25 | 48356004 | 48616542 |
| XM_021612722.2 | False | 5759 | mRNA | 0.47 | 25 | 48356004 | 48616542 |
| XM_021612724.2 | False | 5696 | mRNA | 0.47 | 25 | 48356004 | 48616542 |
| XM_021612725.2 | False | 5672 | mRNA | 0.47 | 24 | 48356004 | 48616542 |
| XM_021612726.2 | False | 5657 | mRNA | 0.47 | 24 | 48356004 | 48616542 |
| XM_021612727.2 | False | 5618 | mRNA | 0.47 | 23 | 48356004 | 48616542 |
| XM_021612728.2 | False | 5594 | mRNA | 0.47 | 24 | 48356004 | 48616542 |
| XM_036985525.1 | False | 5756 | mRNA | 0.47 | 25 | 48356004 | 48616542 |
| XM_036985526.1 | False | 5654 | mRNA | 0.47 | 24 | 48356004 | 48616542 |
| XM_036985528.1 | False | 5603 | mRNA | 0.47 | 23 | 48356004 | 48616542 |
| XM_036985529.1 | False | 5600 | mRNA | 0.47 | 23 | 48356004 | 48616542 |
| XM_036985530.1 | False | 5540 | mRNA | 0.47 | 23 | 48356004 | 48616542 |
| XM_036985533.1 | False | 5612 | mRNA | 0.47 | 23 | 48356004 | 48616542 |
| XM_021612709.2 | False | 5937 | mRNA | 0.48 | 26 | 48356004 | 48616543 |
| XM_021612712.2 | False | 5895 | mRNA | 0.48 | 25 | 48356004 | 48616543 |
| XM_021612713.2 | False | 5874 | mRNA | 0.48 | 26 | 48356004 | 48616543 |
| XM_021612715.2 | False | 5835 | mRNA | 0.47 | 25 | 48356004 | 48616543 |
| XM_021612716.2 | False | 5832 | mRNA | 0.48 | 25 | 48356004 | 48616543 |
| XM_036985522.1 | False | 5934 | mRNA | 0.48 | 26 | 48356004 | 48616543 |
| XM_036985523.1 | False | 5892 | mRNA | 0.48 | 25 | 48356004 | 48616543 |
| XM_021612710.2 | False | 5384 | mRNA | 0.48 | 26 | 48356004 | 48616588 |
| TU813956 | True | 721 | TUCP | 0.48 | 4 | 48542291 | 48616523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529989 | LOC106568683 | coding | downstream | 12994 | 48329684 ~ 48343010 (-) |
| LOC110529987 | LOC106568679 | coding | downstream | 461828 | 47726790 ~ 47894176 (-) |
| LOC110529117 | NA | coding | downstream | 699936 | 47655052 ~ 47656068 (-) |
| LOC110529981 | LOC106568675 | coding | downstream | 916062 | 47397783 ~ 47439942 (-) |
| LOC110529978 | LOC106568670 | coding | downstream | 1052085 | 47298295 ~ 47303919 (-) |
| LOC110529994 | LOC106568693 | coding | upstream | 505461 | 49122049 ~ 49140712 (-) |
| LOC118965653 | NA | coding | upstream | 780211 | 49396799 ~ 49396853 (-) |
| LOC110529999 | LOC106568697 | coding | upstream | 826120 | 49442708 ~ 49491248 (-) |
| LOC110530002 | LOC106568700 | coding | upstream | 908150 | 49524738 ~ 49529686 (-) |
| LOC118965614 | NA | coding | upstream | 960515 | 49577103 ~ 49578807 (-) |
| G716289 | NA | non-coding | downstream | 5438 | 48350367 ~ 48350566 (-) |
| G716288 | NA | non-coding | downstream | 6193 | 48349598 ~ 48349811 (-) |
| G716285 | NA | non-coding | downstream | 8961 | 48346843 ~ 48347043 (-) |
| G716261 | NA | non-coding | downstream | 47537 | 48308186 ~ 48308467 (-) |
| G716253 | NA | non-coding | downstream | 57216 | 48298565 ~ 48298788 (-) |
| G716401 | NA | non-coding | upstream | 42759 | 48659347 ~ 48659569 (-) |
| G716408 | NA | non-coding | upstream | 57813 | 48674401 ~ 48674730 (-) |
| G716409 | NA | non-coding | upstream | 59554 | 48676142 ~ 48676553 (-) |
| G716466 | NA | non-coding | upstream | 146739 | 48763327 ~ 48763613 (-) |
| G716470 | NA | non-coding | upstream | 154026 | 48770614 ~ 48770829 (-) |
| G715865 | NA | other | downstream | 66423 | 48288942 ~ 48289581 (-) |
| G714425 | LOC106568665 | other | downstream | 1177268 | 47178424 ~ 47178736 (-) |
| LOC110529973 | LOC106568664 | other | downstream | 1298344 | 47051073 ~ 47067973 (-) |
| crfb16 | LOC106568648 | other | downstream | 2030323 | 46309732 ~ 46325685 (-) |
| G712814 | NA | other | downstream | 2897756 | 45457777 ~ 45458248 (-) |
| G716463 | LOC106591423 | other | upstream | 143324 | 48759912 ~ 48761163 (-) |
| G716480 | tnk2 | other | upstream | 165533 | 48782121 ~ 48782515 (-) |
| G716488 | NA | other | upstream | 171933 | 48788521 ~ 48788962 (-) |
| G718489 | NA | other | upstream | 1169086 | 49785674 ~ 49837696 (-) |
| LOC110530011 | LOC106568709 | other | upstream | 1250042 | 49866272 ~ 49937001 (-) |
| LOC118965521 | NA | coding | downstream | 5665 | 48531522 ~ 48536626 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000003_00596144_00607951 | NA | coding | CI01000003 | null | 596144 ~ 608038 (+) |
