adipoqb (LOC100653481)


Basic Information

Item Value
gene id adipoqb
gene name LOC100653481
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 49117727 ~ 49120309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611257.2
GACAGGCAATCAGTAATAAGTTACACATGTCCCCCAAGGACACTGGCCACAGGACAACTGGACTGTGACACACTGCAGCCTCTGAGTGAGGGTGGTTTTCTTAGGGGACGCCACTGAACACTCGCCTCTCCGAGGGAGAAAAACATAGACAAGTGTCAAAGGTTATACAGGTTGTGGGGTTATATAGAAAGTGCCATGAAGCTAATGTGGAGCCTGCTGCTGCTGGGCCTGATGCTGGCTGGGAGCTTTAGCGTGGCTCAGGAGGAAGatggagaagaggcagaggaacCAGCCGAGGATGCAGCTGTAGAAGATGAAGAGGCAGCTGCAGACAATGAAGAGGCGGCGGTGGAGGTGGAAGAGCCCGAGGGTCCTGGGACAGAAGCCGGCATGACTGACAACCGGCAGCCTTGTGCCATGTGGATGGGAGGAGTGCCAGGCACTCCAGGGCACAGTGGGCACCTAGGGAGAGACGGTAGAGACGGGCACGACGGCCCTCGAGGTGAGAAAGGAGATACAGgtgaaccaggtgagaAGGGAGAGCCTGGCGAAAAGGGCGGCAACGGCGCTCCGGGACCACGCGGTTTCCCTGGCAACCCCGGTCTGAAGGGGGCACAGGGCGAGAGCGCCCTGTTGTATCATTCCTCCTTCAGCGTGGGCCTGACAGATCCCGTCCCCGCCACCAACGTGCCCATCCGTTTCAATAAATTCTTCCACAACGAGCAGCACCACTATGATGACGTGAGCGGAAAGTTCCACTGCCTCCTCCCCGGGGTCTACTTCTTCACATACCACCTCACAGTCTACACCAAAGATGCTCGGGTGAGCTTGTTCAAGAACGACAAGCCCGTCATGTTCACCTACGACCAGTACCACGAGGGCAACGTGGACCAGGCCTCGGGGGCCCTCATACTGAGGCTGCAGTCTGGGGACGAGGTTTGGCTGCAGATCTACGGAGATGAGGATTTTGGGGGGGTGTATGCTGACAACACCAACGACTCCACCTTCTCCGGGTTTCTTTTGTATCCCGACATGGGAGAGTTGGAGGAAAGGAGACGTCGCTCTGTTGGAGTTAGTAGACACTGAGGTTGTGCAGGACCTGAAGGGTGATATTTAGAGCTGGGTGGGCTGTAGTGAATTTTTCCTGACTGCTCTATATGCATACATTGCCCTCTGACTGGGGACAGGGGTAATAAGTAGCTTCTTAAATTAGTATGTTTTAAAAGAATGCACcaaatgttttaaatgtgttaGTTGTATGATCTATAACATTTTCAATTGTTAGGTGGATTCTAGCAATAGAGACATTTAGTATTCAATGTAATAAGTTGTGCACTAACAAAAAGAGTATTGCCTGGATGGCTTTATGGCAGTGTCACATATTTGGGCAGTGTCTGTGAAATAATAAAATGTGTTATAGCAAATGTAAAA
>NM_001246352.1
GTTATATAGAAAGTGCCATGAAGCTAATGTGGAGCCTGCTGCTGCTGGGCCTGATGCTGGCTGGGAGCTTTAGCGTGGCTCAGGAGGAAGatggagaagaggcagaggaacCAGCCGAGGATGCAGCTGTAGAAGATGAAGAGGCAGCTGCAGACAATGAAGAGGCGGCGGTGGAGGTGGAAGAGCCCGAGGGTCCTGGGACAGAAGCCGGCATGACTGACAACCGGCAGCCTTGTGCCATGTGGATGGGAGGAGTGCCAGGCACTCCAGGGCACAGTGGGCACCTAGGGAGAGACGGTAGAGACGGGCACGACGGCCCTCGAGGTGAGAAAGGAGATACAGgtgaaccaggtgagaAGGGAGAGCCTGGCGAAAAGGGCGGCAACGGCGCTCCGGGACCACGCGGTTTCCCTGGCAACCCCGGTCTGAAGGGGGCACAGGGCGAGAGCGCCCTGTTGTATCATTCCTCCTTCAGCGTGGGCCTGACAGATCCCGTCCCCGCCACCAACGTGCCCATCCGTTTCAATAAATTCTTCCACAACGAGCAGCACCACTATGATGACGTGAGCGGAAAGTTCCACTGCCTCCTCCCCGGGGTCTACTTCTTCACATACCACCTCACAGTCTACACCAAAGATGCTCGGGTGAGCTTGTTCAAGAACGACAAGCCCGTCATGTTCACCTACGACCAGTACCACGAGGGCAACGTGGACCAGGCCTCGGGGGCCCTCATACTGAGGCTGCAGTCTGGGGACGAGGTTTGGCTGCAGATCTACGGAGATGAGGATTTTGGGGGGGTGTATGCTGACAACACCAACGACTCCACCTTCTCCGGGTTTCTTTTGTATCCCGACATGGGAGAGTTGGAGGAAAGGAGACGTCGCTCTGTTGGAGTTAGTAGACACTGAGGTTGTG

Function

NR:

description
adiponectin precursor

GO:

id name namespace
GO:0005581 collagen trimer cellular_component

KEGG:

id description
K07296 ADIPOQ, ACDC; adiponectin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611257.2 False 1431 mRNA 0.52 3 49117727 49120309
NM_001246352.1 True 915 mRNA 0.58 2 49118907 49119971

Neighbor

gene id symbol gene type direction distance location
LOC110530923 LOC106568690 coding upstream 186049 48902937 ~ 48931678 (+)
tnk2b tnk2 coding upstream 314310 48678813 ~ 48806257 (+)
si:dkey-181m9.8 LOC106568680 coding upstream 955181 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 1611493 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 1665191 47440133 ~ 47452536 (+)
LOC110529995 LOC106568692 coding downstream 27658 49147967 ~ 49198179 (+)
LOC110530924 LOC106568797 coding downstream 86690 49206999 ~ 49209154 (+)
gpr158b LOC106568695 coding downstream 158540 49278849 ~ 49381386 (+)
LOC110529997 LOC106568696 coding downstream 266856 49387165 ~ 49420283 (+)
LOC110530001 LOC106568699 coding downstream 386475 49506784 ~ 49566389 (+)
G716654 NA non-coding upstream 36427 48999365 ~ 49081300 (+)
G716639 NA non-coding upstream 142631 48974782 ~ 48975096 (+)
G716552 NA non-coding upstream 247239 48870255 ~ 48870488 (+)
G716551 NA non-coding upstream 248201 48869326 ~ 48869526 (+)
G716545 NA non-coding upstream 250985 48866526 ~ 48866742 (+)
G716752 NA non-coding downstream 32095 49152404 ~ 49152603 (+)
G716755 NA non-coding downstream 37011 49157320 ~ 49157540 (+)
G716763 NA non-coding downstream 50699 49171008 ~ 49171275 (+)
G716766 NA non-coding downstream 53593 49173902 ~ 49174216 (+)
G716768 NA non-coding downstream 54591 49174900 ~ 49175274 (+)
G716133 NA other upstream 356987 48760343 ~ 48760740 (+)
G716035 LOC106581475 other upstream 573563 48537743 ~ 48544164 (+)
G713574 NA other upstream 2348481 46715915 ~ 46769246 (+)
G713405 NA other upstream 2651500 46465398 ~ 46466227 (+)
G711912 NA other upstream 3323178 45793269 ~ 45794549 (+)
G716862 NA other downstream 212532 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 425903 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 733078 49853027 ~ 49854435 (+)
LOC110530019 LOC106568718 other downstream 1265237 50384296 ~ 50397007 (+)
LOC110530024 LOC106568723 other downstream 1516387 50607401 ~ 50641183 (+)

Expression


Co-expression Network