LOC110529995 (LOC106568692)


Basic Information

Item Value
gene id LOC110529995
gene name LOC106568692
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 49147967 ~ 49198179 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612742.2
caacttttgattggtacagtctgtgtgtgcgtgcacatgttTGTTAACTCCTTTCTCCTCTACTTCAGGTGTGTTTGAACTGATGTCCTTGGTGATCTCTGGGATGAAATCTATAATGGACAGAAATGAGGACTTTACATTTCTTAAAAGCATGATCATGGAAAGGAGATTCCATCTACTGGTCAAGATCCATGCGAGGTTGAGGCGGTTTGGATCAAGGAATCCTGTCCCGGTCCGGGATAACGCAAAGAGTCTGGCCTGTAACTTGGCTGAGGAGCTGTGGACTCAAGTGGCTAGTGCTGAATGTTCAGAGTTGATCAGCCTGCTCTCCAACCCGCACATCAAGGGCCTTCTCTCTGTTCACGACATAGTAGCACAGAAAGGTTATGACCCTGAGCTGCCACCCCTACCTGATAACAttgaagaagaggatgaggacTCTGTGAAGATTATAAGCCTGTTCAAAAGCCAGGAGCCACTGgggGCCACCATAAAGAGAGATGAATCCACTGGAGCTATAGTTGTAGCAAGGATCATGAGAGGGGGTGCTGCAGACAGAAGTgGTCTGATTCATGAGGGCGATGAGCTAAGGGAAGTCAATGGAGTCCAAATGGAGGATAAGACACCGGAGGAAATCATTCCTAttatgGCTCAATCGCAGGGAGAGGTGACGTTTAAAGTGATACCGGTACCTGGCATCAAGGAAGAGCTGTCAGCCAATGAGACTATGTTATTTGTACGGTCGCTCTTTGACTACAATCCCGAGGAGGACCCTGCCATCCCCTGCAGACAGGCAGGGCTGGGCTTCAAGAGGGGGGACATCCTTCAGATCGTTAACCAGGAGGACGACACCTGGTGGCAAGCCTGTCGTCATGGTGACAGCAACTCCCGAGCAGGACTCATCCCCTCCAGGCAACTTCAGGAGAGGAGAGTCGCTCTCCAGCGGCCCAAAGCCTTATTTAAACCTCAGAGAGTCCCAAACAAAGTGACAGtggtgGAGGATGCAGACTATGGAGCTATTACAGGAATCCACATCGCTGGTCTGAGAAGGAGTTTCCGGCTGGGCAGGAGGGGCGGTAGGAGTGGGAATGTTGAGTCTAAAAGGAAGAGCCAGGAGATGGGAGGAGCCACACAGACACCCACCTACCTGGAAGTGGCACCGTACTGCAGGGAGCATAAAGAGGGACGTCGGCTGGTCCTGCTGGTTGGTCCCAGTGGAGTTGGGCTGAGTgagatgaagaggagactccTGCTCTCTGACCCTGACCACTATGGTGTCACTGTTCCACACACCACCAGAGAGAAGAGGAAGCAGGAGAAAGATGGGGTAGAGTACCACTTTGTCTCAAGGCAGACGTTTGAAATGGACATCGTCAACCACAAGTTTTTAGAGTATGGGGAGCACAGAGGGAACTACTACGGGACCAGTCTGGAGTCAGTGCACAAGGTCATAGGGGAGGACAAGGTGTGCCTACTGGATGTGCAGCCTAATACTGTACAGCGCTTACACACAACCGAGTTCAAACCATGTGTTGTTTTTGTGAAGCCACCATCGATTCAGGAGCTACGTTTTAGCCGGAGGAAAGCTACATTAATTTCCACCCAAGATATGACGAAACTGACAAAGACATTTTCGGAAGAGGACTTTGAAGATATGATTAGCTCAGCAGAAGCCATGGATAGCCAGTACGGCCACCTGTTTGAGATGGTCGTCGTCAATGGCGATTTCGCCATGGCATTCAACAAACTGAGGGCGGAGCTGGAAAAGCTTGAGACGGAGGCGCCTCAGTGGATTCCTGTGGAGTGGACCAGTCATACCAAACAGAACACAGAGAGTGTGTGCTGAACACACTAGGAGGCTGGTTATGCATGTCTAATTCACactcacaggaggctgctgaggggaggatggctactaataat

Function

NR:

description
MAGUK p55 subfamily member 7-like

GO: NA

KEGG:

id description
K24049 MPP3_7; MAGUK p55 subfamily member 3/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612742.2 True 1923 mRNA 0.51 16 49147967 49198179

Neighbor

gene id symbol gene type direction distance location
adipoqb LOC100653481 coding upstream 27658 49117727 ~ 49120309 (+)
LOC110530923 LOC106568690 coding upstream 216289 48902937 ~ 48931678 (+)
tnk2b tnk2 coding upstream 344550 48678813 ~ 48806257 (+)
si:dkey-181m9.8 LOC106568680 coding upstream 985421 48145790 ~ 48162546 (+)
LOC110529986 LOC106568678 coding upstream 1641733 47468480 ~ 47506234 (+)
LOC110530924 LOC106568797 coding downstream 8820 49206999 ~ 49209154 (+)
gpr158b LOC106568695 coding downstream 80670 49278849 ~ 49381386 (+)
LOC110529997 LOC106568696 coding downstream 188986 49387165 ~ 49420283 (+)
LOC110530001 LOC106568699 coding downstream 308605 49506784 ~ 49566389 (+)
LOC110530003 LOC106568702 coding downstream 393051 49591230 ~ 49600103 (+)
G716654 NA non-coding upstream 66667 48999365 ~ 49081300 (+)
G716639 NA non-coding upstream 172871 48974782 ~ 48975096 (+)
G716552 NA non-coding upstream 277479 48870255 ~ 48870488 (+)
G716551 NA non-coding upstream 278441 48869326 ~ 48869526 (+)
G716545 NA non-coding upstream 281225 48866526 ~ 48866742 (+)
G716747 NA non-coding downstream 95 49198274 ~ 49203279 (+)
G716748 NA non-coding downstream 44903 49243082 ~ 49244007 (+)
G716810 NA non-coding downstream 57061 49255240 ~ 49255456 (+)
G716819 NA non-coding downstream 68055 49266234 ~ 49266441 (+)
G716839 NA non-coding downstream 99479 49297658 ~ 49297908 (+)
G716133 NA other upstream 387227 48760343 ~ 48760740 (+)
G716035 LOC106581475 other upstream 603803 48537743 ~ 48544164 (+)
G713574 NA other upstream 2378721 46715915 ~ 46769246 (+)
G713405 NA other upstream 2681740 46465398 ~ 46466227 (+)
G711912 NA other upstream 3353418 45793269 ~ 45794549 (+)
G716862 NA other downstream 134662 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 348033 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 655208 49853027 ~ 49854435 (+)
LOC110530019 LOC106568718 other downstream 1187367 50384296 ~ 50397007 (+)
LOC110530024 LOC106568723 other downstream 1438517 50607401 ~ 50641183 (+)

Expression


Co-expression Network