Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965653 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49396799 ~ 49396853 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053034.1 | True | 55 | mRNA | 0.42 | 1 | 49396799 | 49396853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529994 | LOC106568693 | coding | downstream | 256087 | 49122049 ~ 49140712 (-) |
| dlg1l | LOC106568684 | coding | downstream | 780211 | 48356004 ~ 48616588 (-) |
| LOC118965521 | NA | coding | downstream | 860173 | 48531522 ~ 48536626 (-) |
| LOC110529989 | LOC106568683 | coding | downstream | 1053789 | 48329684 ~ 48343010 (-) |
| LOC110529987 | LOC106568679 | coding | downstream | 1502623 | 47726790 ~ 47894176 (-) |
| LOC110529999 | LOC106568697 | coding | upstream | 45855 | 49442708 ~ 49491248 (-) |
| LOC110530002 | LOC106568700 | coding | upstream | 127885 | 49524738 ~ 49529686 (-) |
| LOC118965614 | NA | coding | upstream | 180250 | 49577103 ~ 49578807 (-) |
| LOC110530004 | LOC106568703 | coding | upstream | 204686 | 49601539 ~ 49612229 (-) |
| LOC110530005 | NA | coding | upstream | 232724 | 49629577 ~ 49630769 (-) |
| G717452 | NA | non-coding | downstream | 20087 | 49376510 ~ 49376712 (-) |
| G717450 | NA | non-coding | downstream | 22743 | 49373563 ~ 49374056 (-) |
| G717446 | NA | non-coding | downstream | 26867 | 49369688 ~ 49369932 (-) |
| G717440 | LOC106568695 | non-coding | downstream | 36821 | 49359616 ~ 49359978 (-) |
| G717425 | NA | non-coding | downstream | 50910 | 49345547 ~ 49345889 (-) |
| G717527 | NA | non-coding | upstream | 116222 | 49513075 ~ 49514522 (-) |
| G717528 | NA | non-coding | upstream | 119847 | 49516700 ~ 49516983 (-) |
| G717531 | NA | non-coding | upstream | 123301 | 49520154 ~ 49520498 (-) |
| G717532 | NA | non-coding | upstream | 124753 | 49521606 ~ 49521933 (-) |
| G716488 | NA | other | downstream | 607837 | 48788521 ~ 48788962 (-) |
| G716480 | tnk2 | other | downstream | 614284 | 48782121 ~ 48782515 (-) |
| G716463 | LOC106591423 | other | downstream | 635636 | 48759912 ~ 48761163 (-) |
| G715865 | NA | other | downstream | 1107218 | 48288942 ~ 48289581 (-) |
| G718489 | NA | other | upstream | 388821 | 49785674 ~ 49837696 (-) |
| LOC110530011 | LOC106568709 | other | upstream | 469777 | 49866272 ~ 49937001 (-) |
| G719151 | NA | other | upstream | 1540075 | 50936928 ~ 50939471 (-) |
| LOC110530043 | LOC106568739 | other | upstream | 1855502 | 51252355 ~ 51259061 (-) |
| G721275 | NA | other | upstream | 3364186 | 52761039 ~ 52761451 (-) |
