Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965614 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49577103 ~ 49578807 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053024.1 | False | 1053 | mRNA | 0.39 | 3 | 49577103 | 49578807 |
| TU815351 | True | 389 | lncRNA | 0.40 | 2 | 49577761 | 49578615 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530002 | LOC106568700 | coding | downstream | 47417 | 49524738 ~ 49529686 (-) |
| LOC110529999 | LOC106568697 | coding | downstream | 85855 | 49442708 ~ 49491248 (-) |
| LOC118965653 | NA | coding | downstream | 180250 | 49396799 ~ 49396853 (-) |
| LOC110529994 | LOC106568693 | coding | downstream | 436391 | 49122049 ~ 49140712 (-) |
| dlg1l | LOC106568684 | coding | downstream | 960515 | 48356004 ~ 48616588 (-) |
| LOC110530004 | LOC106568703 | coding | upstream | 22732 | 49601539 ~ 49612229 (-) |
| LOC110530005 | NA | coding | upstream | 50770 | 49629577 ~ 49630769 (-) |
| LOC110530006 | LOC106568704 | coding | upstream | 56668 | 49635475 ~ 49647848 (-) |
| zgc:110269 | LOC106568705 | coding | upstream | 69126 | 49647933 ~ 49655158 (-) |
| LOC110530011 | LOC106568709 | coding | upstream | 287465 | 49866272 ~ 49937001 (-) |
| G717565 | NA | non-coding | downstream | 3005 | 49573848 ~ 49574098 (-) |
| G717560 | NA | non-coding | downstream | 9527 | 49567369 ~ 49567576 (-) |
| G717556 | NA | non-coding | downstream | 18021 | 49558865 ~ 49559082 (-) |
| G717554 | NA | non-coding | downstream | 20124 | 49556761 ~ 49556979 (-) |
| G717553 | NA | non-coding | downstream | 20469 | 49556274 ~ 49556634 (-) |
| G717525 | NA | non-coding | upstream | 12423 | 49591230 ~ 49593744 (-) |
| G717596 | NA | non-coding | upstream | 71784 | 49650591 ~ 49683675 (-) |
| G717617 | NA | non-coding | upstream | 88929 | 49667736 ~ 49672776 (-) |
| G717622 | NA | non-coding | upstream | 99410 | 49678217 ~ 49683069 (-) |
| G716488 | NA | other | downstream | 788141 | 48788521 ~ 48788962 (-) |
| G716480 | tnk2 | other | downstream | 794588 | 48782121 ~ 48782515 (-) |
| G716463 | LOC106591423 | other | downstream | 815940 | 48759912 ~ 48761163 (-) |
| G715865 | NA | other | downstream | 1287522 | 48288942 ~ 48289581 (-) |
| G718489 | NA | other | upstream | 206867 | 49785674 ~ 49837696 (-) |
| G719151 | NA | other | upstream | 1358121 | 50936928 ~ 50939471 (-) |
| LOC110530043 | LOC106568739 | other | upstream | 1673548 | 51252355 ~ 51259061 (-) |
| G721275 | NA | other | upstream | 3182232 | 52761039 ~ 52761451 (-) |
| LOC118965521 | NA | coding | downstream | 1041135 | 48531522 ~ 48536626 (-) |
