Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965625 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 49983389 ~ 49986205 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: apolipoprotein D |
| id | name | namespace |
|---|---|---|
| GO:0006810 | transport | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005215 | transporter activity | molecular_function |
| GO:0008289 | lipid binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118965625 | True | 329 | mRNA | 0.51 | 4 | 49983389 | 49986205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530012 | LOC106568711 | coding | downstream | 13307 | 49964914 ~ 49970082 (-) |
| LOC110530011 | LOC106568709 | coding | downstream | 46388 | 49866272 ~ 49937001 (-) |
| LOC118965522 | NA | coding | downstream | 97163 | 49881643 ~ 49886226 (-) |
| zgc:110269 | LOC106568705 | coding | downstream | 328231 | 49647933 ~ 49655158 (-) |
| LOC110530006 | LOC106568704 | coding | downstream | 335541 | 49635475 ~ 49647848 (-) |
| LOC110530015 | LOC106568800 | coding | upstream | 107292 | 50093497 ~ 50095929 (-) |
| LOC110530016 | LOC106568717 | coding | upstream | 351526 | 50337731 ~ 50366270 (-) |
| LOC110530021 | LOC106568720 | coding | upstream | 426775 | 50412980 ~ 50434788 (-) |
| LOC110530027 | LOC106568725 | coding | upstream | 679426 | 50665631 ~ 50674317 (-) |
| LOC110530028 | LOC106568726 | coding | upstream | 691967 | 50678172 ~ 50685258 (-) |
| G718598 | NA | non-coding | downstream | 35266 | 49947768 ~ 49948123 (-) |
| G718594 | NA | non-coding | downstream | 39161 | 49943716 ~ 49944228 (-) |
| G718590 | NA | non-coding | downstream | 48353 | 49934833 ~ 49935036 (-) |
| G718581 | NA | non-coding | downstream | 58509 | 49924642 ~ 49924880 (-) |
| G718580 | NA | non-coding | downstream | 59061 | 49924061 ~ 49924328 (-) |
| G718625 | NA | non-coding | upstream | 8721 | 49994926 ~ 50001193 (-) |
| G718663 | LOC106568713 | non-coding | upstream | 65240 | 50051445 ~ 50059575 (-) |
| G718648 | LOC106568713 | non-coding | upstream | 82308 | 50068513 ~ 50071983 (-) |
| G718780 | NA | non-coding | upstream | 254796 | 50241001 ~ 50241249 (-) |
| G718781 | NA | non-coding | upstream | 255459 | 50241664 ~ 50241894 (-) |
| G718489 | NA | other | downstream | 145693 | 49785674 ~ 49837696 (-) |
| G716488 | NA | other | downstream | 1194427 | 48788521 ~ 48788962 (-) |
| G716480 | tnk2 | other | downstream | 1200874 | 48782121 ~ 48782515 (-) |
| G716463 | LOC106591423 | other | downstream | 1222226 | 48759912 ~ 48761163 (-) |
| G719151 | NA | other | upstream | 950723 | 50936928 ~ 50939471 (-) |
| LOC110530043 | LOC106568739 | other | upstream | 1266150 | 51252355 ~ 51259061 (-) |
| G721275 | NA | other | upstream | 2774834 | 52761039 ~ 52761451 (-) |
| LOC110529122 | LOC106568971 | other | upstream | 3476977 | 53462034 ~ 53478913 (-) |
| G722459 | NA | other | upstream | 3511943 | 53495804 ~ 53499730 (-) |
