hsd17b7 (LOC106568727)


Basic Information

Item Value
gene id hsd17b7
gene name LOC106568727
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50690347 ~ 50710421 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985590.1
GATGTGTCGTCATCCAATCACACCATGTAGCCGTGTCTGCATAGGCTATCGTTGTGTTCATAACATCGGACCAGAGTGTTCTACATCGATAGTATTATTTTCTGTTATCTTCTTAACTTTCACCAGTTTCCTACATTTGAAGAAGAGCCATCATGGAGAAAGTGATTTTAGTGACCGGTGCGAACAGTTTGTGTCATCTCCTATCTATGACCTCTCCATCTCCACAGTGGCATCGGCCTAGCCCTGTGTGAGCGGCTGCTCTATGAGGACAGTCAGCTGCAGCTGTGTCTGGCCTGCAGGAACATGCAGAGGGCTGAGGCGGCCCGCTCCGCTCTGCTGACCTCTCACCCCGACGCCCAAATAGACCTGCTGCACCTGGATGTAGGCTCTGTCCGCTCGGTTCTCCACGCCGCCCACAAGGTCAAGGCTAGGTACAACAGACTGGACTACCTATACCTTAATGCCGGGATCATGCCAAATCCACAGATTGACATCAAAGCCTTTTTCAAGGGCCTATTTTCTAGCAACGTCGTCAAAATGTTTGCCACAGCAGAGGGCCTCCTGACCCAGCAGGACCATGTCAACAAAGATGGACTACAGGAAGTGTTCGCCACAAACCTGTTTGGACACTTTGTGCTGGTCAGGGAGCTAGACTCTATCCTTTGCCAGGCTGGTCAGACCTCCCGGGTAGTGTGGACTTCATCCAGCAATGCCAGACGCTCGGCCTTCAGTCTAGACGATGTCCAGCACAGACTGGGGACCGAGCCCTACGCGTCCTCCAAGTATGCCTCCGACCTCATCAGCCTTGCCCtcaacagacacaaaaacagCCAGGGGCTGTACTCATCAGTGATTTGTCCAGGGCTGGTGATGACCAATCTTACCTATGGCATCCTCCCCTCCTTCTTCTGGACCCTCATCATGCCCATCATGTATCTTATACGAATCTTCACCAACACGTTCACACTGACACCGCACAATGGAGCTGGAGCATTGCACTCGCTGTTTCTGAAAAAAACTGAGTCCCTGGATCCGAAGGCAAAGTATCACAGTTTGACGTCAGGCATGGGGAGCAACTACACGCAGCCTCGACAAaTGGACATCGATGACGACATGTCAGAGGCCCTGTATGTGAAACTGCTGGAAATGGAAAAATCTGCTCGTAAGAGATTGAAAGAAGAGGATGACAATAAACAAGCCTACAAAAAGTACCTCAACCAGACAGAGTAGTATTTTGTATGGCTGTTCTCCTTTACTAACTAGTTTAGGCCTAATCACACAACTTTTATTCTATAGCATATAATATataattttgttacgttacagccttattctaaaatgtattaaatacatttttttaaatctcagcaatctacaccacaatgacaaagtgaaaaaatattttttgaattgtttgcaaatgtattaaacaata
>XM_021612799.2
CGACAGTGATGTGTCGTCATCCAATCACACCATGTAGCCGTGTCTGCATAGGCTATCGTTGTGTTCATAACATCGGACCAGAGTGTTCTACATCGATAGTATTATTTTCTGTTATCTTCTTAACTTTCACCAGTTTCCTACATTTGAAGAAGAGCCATCATGGAGAAAGTGATTTTAGTGACCGGTGCGAACAGTGGCATCGGCCTAGCCCTGTGTGAGCGGCTGCTCTATGAGGACAGTCAGCTGCAGCTGTGTCTGGCCTGCAGGAACATGCAGAGGGCTGAGGCGGCCCGCTCCGCTCTGCTGACCTCTCACCCCGACGCCCAAATAGACCTGCTGCACCTGGATGTAGGCTCTGTCCGCTCGGTTCTCCACGCCGCCCACAAGGTCAAGGCTAGGTACAACAGACTGGACTACCTATACCTTAATGCCGGGATCATGCCAAATCCACAGATTGACATCAAAGCCTTTTTCAAGGGCCTATTTTCTAGCAACGTCGTCAAAATGTTTGCCACAGCAGAGGGCCTCCTGACCCAGCAGGACCATGTCAACAAAGATGGACTACAGGAAGTGTTCGCCACAAACCTGTTTGGACACTTTGTGCTGGTCAGGGAGCTAGACTCTATCCTTTGCCAGGCTGGTCAGACCTCCCGGGTAGTGTGGACTTCATCCAGCAATGCCAGACGCTCGGCCTTCAGTCTAGACGATGTCCAGCACAGACTGGGGACCGAGCCCTACGCGTCCTCCAAGTATGCCTCCGACCTCATCAGCCTTGCCCtcaacagacacaaaaacagCCAGGGGCTGTACTCATCAGTGATTTGTCCAGGGCTGGTGATGACCAATCTTACCTATGGCATCCTCCCCTCCTTCTTCTGGACCCTCATCATGCCCATCATGTATCTTATACGAATCTTCACCAACACGTTCACACTGACACCGCACAATGGAGCTGGAGCATTGCACTCGCTGTTTCTGAAAAAAACTGAGTCCCTGGATCCGAAGGCAAAGTATCACAGTTTGACGTCAGGCATGGGGAGCAACTACACGCAGCCTCGACAAaTGGACATCGATGACGACATGTCAGAGGCCCTGTATGTGAAACTGCTGGAAATGGAAAAATCTGCTCGTAAGAGATTGAAAGAAGAGGATGACAATAAACAAGCCTACAAAAAGTACCTCAACCAGACAGAGTAGTATTTTGTATGGCTGTTCTCCTTTACTAACTAGTTTAGGCCTAATCACACAACTTTTATTCTATAGCATATAATATataattttgttacgttacagccttattctaaaatgtattaaatacatttttttaaatctcagcaatctacaccacaatgacaaagtgaaaaaatattttttgaattgtttgcaaatgtattaaacaata

Function

NR:

description
3-keto-steroid reductase

GO: NA

KEGG:

id description
K13373 HSD17B7; 17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985590.1 False 1435 mRNA 0.47 9 50690347 50710414
XM_021612799.2 True 1402 mRNA 0.47 9 50690347 50710421
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110530028 LOC106568726 coding downstream 5089 50678172 ~ 50685258 (-)
LOC110530027 LOC106568725 coding downstream 16030 50665631 ~ 50674317 (-)
LOC110530021 LOC106568720 coding downstream 255559 50412980 ~ 50434788 (-)
LOC110530016 LOC106568717 coding downstream 324077 50337731 ~ 50366270 (-)
LOC110530015 LOC106568800 coding downstream 594418 50093497 ~ 50095929 (-)
LOC110530033 LOC106568728 coding upstream 5707 50716128 ~ 50729934 (-)
LOC110530034 LOC106568730 coding upstream 30555 50740976 ~ 50767911 (-)
LOC110530035 LOC106568731 coding upstream 80799 50791220 ~ 50793594 (-)
LOC110530036 LOC106568732 coding upstream 124119 50834540 ~ 50848805 (-)
LOC110530040 LOC106568735 coding upstream 322144 51032565 ~ 51067801 (-)
G718986 NA non-coding downstream 118607 50571308 ~ 50571740 (-)
G718945 NA non-coding downstream 164633 50525475 ~ 50525714 (-)
G718834 NA non-coding downstream 237514 50357313 ~ 50452833 (-)
G718798 LOC106598425 non-coding downstream 307256 50297400 ~ 50383091 (-)
G718784 NA non-coding downstream 439291 50250751 ~ 50251056 (-)
G719056 NA non-coding upstream 4161 50714582 ~ 50714934 (-)
G719068 NA non-coding upstream 23656 50734077 ~ 50734533 (-)
G719069 NA non-coding upstream 25838 50736259 ~ 50738316 (-)
G719114 NA non-coding upstream 108361 50818782 ~ 50818987 (-)
LOC110530011 LOC106568709 other downstream 801095 49866272 ~ 49937001 (-)
G718489 NA other downstream 852651 49785674 ~ 49837696 (-)
G716488 NA other downstream 1901385 48788521 ~ 48788962 (-)
G716480 tnk2 other downstream 1907832 48782121 ~ 48782515 (-)
G716463 LOC106591423 other downstream 1929184 48759912 ~ 48761163 (-)
G719151 NA other upstream 226507 50936928 ~ 50939471 (-)
LOC110530043 LOC106568739 other upstream 541934 51252355 ~ 51259061 (-)
G721275 NA other upstream 2050618 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 2752761 53462034 ~ 53478913 (-)
G722459 NA other upstream 2787727 53495804 ~ 53499730 (-)

Expression

hsd17b7(LOC106568727) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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hsd17b7(LOC106568727) Expression in each Bioproject

Bar chart with 21 bars.
hsd17b7(LOC106568727) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
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Co-expression Network