Item | Value |
---|---|
gene id | LOC110530033 |
gene name | LOC106568728 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 50716128 ~ 50729934 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
discoidin domain-containing receptor 2-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021612800.2 | False | 3902 | mRNA | 0.50 | 17 | 50716128 | 50729928 |
XM_036985591.1 | False | 3900 | mRNA | 0.50 | 17 | 50716128 | 50729929 |
XM_036985592.1 | False | 3900 | mRNA | 0.50 | 17 | 50716128 | 50729929 |
XM_036985593.1 | False | 3894 | mRNA | 0.50 | 17 | 50716128 | 50729929 |
XM_036985594.1 | False | 3892 | mRNA | 0.50 | 17 | 50716128 | 50729930 |
XR_002474474.2 | False | 3941 | mRNA | 0.50 | 17 | 50716128 | 50729934 |
TU816969 | True | 1184 | lncRNA | 0.41 | 3 | 50716159 | 50718605 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
hsd17b7 | LOC106568727 | coding | downstream | 5707 | 50690347 ~ 50710421 (-) |
LOC110530028 | LOC106568726 | coding | downstream | 30870 | 50678172 ~ 50685258 (-) |
LOC110530027 | LOC106568725 | coding | downstream | 41811 | 50665631 ~ 50674317 (-) |
LOC110530021 | LOC106568720 | coding | downstream | 281340 | 50412980 ~ 50434788 (-) |
LOC110530016 | LOC106568717 | coding | downstream | 349858 | 50337731 ~ 50366270 (-) |
LOC110530034 | LOC106568730 | coding | upstream | 11042 | 50740976 ~ 50767911 (-) |
LOC110530035 | LOC106568731 | coding | upstream | 61286 | 50791220 ~ 50793594 (-) |
LOC110530036 | LOC106568732 | coding | upstream | 104606 | 50834540 ~ 50848805 (-) |
LOC110530040 | LOC106568735 | coding | upstream | 302631 | 51032565 ~ 51067801 (-) |
LOC110530042 | kcnt2 | coding | upstream | 397680 | 51127614 ~ 51189612 (-) |
G719056 | NA | non-coding | downstream | 1194 | 50714582 ~ 50714934 (-) |
G718931 | NA | non-coding | downstream | 2121 | 50688240 ~ 50714007 (-) |
G718986 | NA | non-coding | downstream | 144388 | 50571308 ~ 50571740 (-) |
G718945 | NA | non-coding | downstream | 190414 | 50525475 ~ 50525714 (-) |
G718834 | NA | non-coding | downstream | 263295 | 50357313 ~ 50452833 (-) |
G719068 | NA | non-coding | upstream | 4143 | 50734077 ~ 50734533 (-) |
G719069 | NA | non-coding | upstream | 6325 | 50736259 ~ 50738316 (-) |
G719114 | NA | non-coding | upstream | 88848 | 50818782 ~ 50818987 (-) |
G719202 | NA | non-coding | upstream | 225535 | 50955469 ~ 50957241 (-) |
G719208 | NA | non-coding | upstream | 269460 | 50999394 ~ 51075009 (-) |
LOC110530011 | LOC106568709 | other | downstream | 826876 | 49866272 ~ 49937001 (-) |
G718489 | NA | other | downstream | 878432 | 49785674 ~ 49837696 (-) |
G716488 | NA | other | downstream | 1927166 | 48788521 ~ 48788962 (-) |
G716480 | tnk2 | other | downstream | 1933613 | 48782121 ~ 48782515 (-) |
G716463 | LOC106591423 | other | downstream | 1954965 | 48759912 ~ 48761163 (-) |
G719151 | NA | other | upstream | 206994 | 50936928 ~ 50939471 (-) |
LOC110530043 | LOC106568739 | other | upstream | 522421 | 51252355 ~ 51259061 (-) |
G721275 | NA | other | upstream | 2031105 | 52761039 ~ 52761451 (-) |
LOC110529122 | LOC106568971 | other | upstream | 2733248 | 53462034 ~ 53478913 (-) |
G722459 | NA | other | upstream | 2768214 | 53495804 ~ 53499730 (-) |