LOC110530034 (LOC106568730)


Basic Information

Item Value
gene id LOC110530034
gene name LOC106568730
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50740976 ~ 50767911 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612801.2
CTGCACCTCAGCATAATCGAATCCGGCCCTTGAGAATTGTGCGTCATCCAAAACAGCACTAGAGCGGCAGATATTCTATCTCGGACTGTAAAAAATTGGACCGCTAGACGCATATTGTGTTAACATAGTGGTTCCATTCCATAGGCGACTAACCAATCAAAGACCTTCGTGAGTGTTGAGCGAGATGCGCGTATTTACAGTATTCTAATAGCGTTGGCATAAAACTAGTGTCGGACTAGTCGTGTATCGGAAGGGCGATGCCAGGGATAACCAAGTATAATTTAGTGGATGATGCACAGGACTTGAGGATCCCCATGCACAACGAGGCGGCATTTCAGCATGGGGTCTGCTTTGAGGCAAAGTACATTGGCAGTCTGGAAGTCGGTCGTCCAAATAGCCGAATGGAGATAGTGGCTGCAATGAGAAGGATAAGGTATGAATTCAAATTGAAGAACATCAAGAAGAAGAAAGTCAACATCATCGTGTCTGCGGATGGTGTAAGGGTGGTTTTGCGAAAAAAGAAAAAGAGGAAAGAGTGGTCTTGGGATGACAATACAGTCATGATAACACAAGATCCCATCTACAGGATTTTCTATGTGTCACATGACGCCCAGGACTTGAAGATCTTCAGTTACATTGCAAGAGATGGAAAGAGCAACATGTTCCGTTGTAATGTCTTCAAATCCAAGAGGAAGTCCCAGGCCATGCGCATCGTGCGGACGGTGGGCCAGGCCTTTGACGTGTGCCACCAGCTGACCCTGCAGCAGACAGGGGAACAGATCTCAGAGGATGGAGGGGACACCAGCACTGCCGACGCAGAGGGGGCAGACGCCGTGCCAGccaagaAGAGGTTGGCATTGTCTGATTCCACTGACCTTGACGCCACTACAGAGGAGAGCATCGACCGTTTGTCATCCGACCAGGACAAGAGCCAGGACCTTCTCAGTAAAGATGGGAAGGACCCAACCCAGCAGCTGACCTCATCCAGGTCAGGGCCCCCTGTGTCAAGCTTGCTAGCTGTGGACTGCTCTGTGGCACACCAGGTGCAGCTTCTCCAGAGACAGctccagcagcaggagcagcaggcccAGGCTGCTGCAGCACAGGTGCGCTTGCTACAGGACCAGCTGTCAGTGGAGGTGTGTGCCAGGACAGACGCCCAGGCCCGGGTTCAGAGACTCCTACTGCAGAACACTGATCTACTGCAGCACATCTCCCTACTGGTCAATCAGATCCAGGAGCTGGAGCTCAAATCTGTTGCAGGACTCAGCTCCAtGGGCTCCCAAGACAGTCTGCTGGAGATCACCTTCCGTGCCAAGCCCCCCTCCTTGCTACatgacatcaccaccaccacccacaccTCCATGGGCCCCCTGCAGGGTCAGCCCCAGATAACCAATGGCCCCTGGGCCTCCATCCTACCAGGGGCCTCTCCTCCAGGGACCAGGGCCCCGGACAGCCACTCTCTGGGCCCGGGCGGAGTGAGGCTGGAGTGCTTCCGCTTCCCCCGCAGTGGGGGAGGGGACAACCACGAGAGCCAGAACCAGGAGGCCGAGAGTCCATGCTCGGGCTGCCCAGGCGGGGAGTCCCCTCTGGTGGTTCTTGGAGCCCTGGAGCTCCTCCGTTTCCGGGAGTCGGGGATAGGTTCGGAGTACGAGTCCAACGCAGATGAGAGCAGTGACAGGGACAGCTGGGGGCGGGGTGAGGGGGCGCGGCCTGAGGGCGCGGCACTTCTGTTCAACGTAATGAATGCGGAGAGCCCCGCGGACTGTCTGGGTGATGAGGTGGCCGTGTAGCCCTCCGCGGCTTCGACTTCACCCAAGAACGAAATCATATCACACAGTCTACAGTTCTATGGTGTTAACTGTTCACCACCCTCCTAACTCTGCTCTGCAGTCCTTTTGTTtgatatttgtttgtttgttttgcattttttgtatttgttggatattttgtttttgtttatattTGGTCACGTTTGTCTGATGTTTGTTTATATCTGTTGTAGTTAATTACATGTGTTTCTTGAATGTGTTTACATTTTTTCATACATTTTGTCTCAGCACTTGACTTGCTGCTGCTGTTCCTGCTCTCCTGGGCTTACTGCAGTGTAGCTGTAGTTTGTGTCACAGCTGTCTGAATATGTGGTTctggtctgtgttattgaagCATTGTGTAATAGTGAAACACACCCAGCATGGCCAGTCGTTGGCGCTGTTTTGTTTTTATGGACAAAAAGACTTTGAATGAGTTGAAAATGAGTAAACGTCTAATGTAAAGACTGCAAACTTCAAAAGCCCGCTGTACTAGTGCTGTATTACATGACTGGATCTCATTTGTGACTGACAATTGATTCAAGACCGTTTACATTCAAGTTTTCCTCCACCGTGATGCTCCATGCAATAAGTCCTCTTTCCCAAGACTTTGGTACGATTCACTTTTGAGCCAACTCAATATCATACACCCAAaaagttgtttgtttgtttggtgcatttgaagaaagaaagaaaattagTTGTCttttgttaacctttctgatctccccatcccggatccgggatcgtgaatacagac

Function

NR:

description
carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like

GO: NA

KEGG:

id description
K16513 NOS1AP, CAPON; carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612801.2 True 2574 mRNA 0.51 10 50740976 50767911
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110530033 LOC106568728 coding downstream 11042 50716128 ~ 50729934 (-)
hsd17b7 LOC106568727 coding downstream 30555 50690347 ~ 50710421 (-)
LOC110530028 LOC106568726 coding downstream 55718 50678172 ~ 50685258 (-)
LOC110530027 LOC106568725 coding downstream 66659 50665631 ~ 50674317 (-)
LOC110530021 LOC106568720 coding downstream 306188 50412980 ~ 50434788 (-)
LOC110530035 LOC106568731 coding upstream 23309 50791220 ~ 50793594 (-)
LOC110530036 LOC106568732 coding upstream 66629 50834540 ~ 50848805 (-)
LOC110530040 LOC106568735 coding upstream 264654 51032565 ~ 51067801 (-)
LOC110530042 kcnt2 coding upstream 359703 51127614 ~ 51189612 (-)
LOC110530043 LOC106568739 coding upstream 484444 51252355 ~ 51259061 (-)
G719069 NA non-coding downstream 2660 50736259 ~ 50738316 (-)
G719068 NA non-coding downstream 6443 50734077 ~ 50734533 (-)
G719056 NA non-coding downstream 26042 50714582 ~ 50714934 (-)
G718931 NA non-coding downstream 26969 50688240 ~ 50714007 (-)
G719114 NA non-coding upstream 50871 50818782 ~ 50818987 (-)
G719202 NA non-coding upstream 187558 50955469 ~ 50957241 (-)
G719208 NA non-coding upstream 231483 50999394 ~ 51075009 (-)
G719250 NA non-coding upstream 313822 51081733 ~ 51082025 (-)
LOC110530011 LOC106568709 other downstream 851724 49866272 ~ 49937001 (-)
G718489 NA other downstream 903280 49785674 ~ 49837696 (-)
G716488 NA other downstream 1952014 48788521 ~ 48788962 (-)
G716480 tnk2 other downstream 1958461 48782121 ~ 48782515 (-)
G716463 LOC106591423 other downstream 1979813 48759912 ~ 48761163 (-)
G719151 NA other upstream 169017 50936928 ~ 50939471 (-)
G721275 NA other upstream 1993128 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 2695271 53462034 ~ 53478913 (-)
G722459 NA other upstream 2730237 53495804 ~ 53499730 (-)

Expression

LOC110530034(LOC106568730) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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LOC110530034(LOC106568730) Expression in each Bioproject

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LOC110530034(LOC106568730) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network