LOC110530035 (LOC106568731)



Basic Information


Item Value
gene id LOC110530035
gene name LOC106568731
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50791220 ~ 50793594 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021612802.2
AGTAGACCACACTGAGAACTAGTTTCACTGCAGTGTTAGAGCCATCGTAGACTAGAAGCTCCGTAACACTACAGAAATACAGCACAGTAGCACAAAGGATCACATCTCATCATCTCCCGCCATGTGCCGAGAACTGGAATCACTGCCTATCACATGTCTGGAGAGGGCAAAGGAACTCAAAGCTCTCTTTAGAAGCTTTCTACAGAAGCCAGATCTGAGCATCAGTCACTCAAACAAGACTGACAAAATATGGTTAAATATGGACGAGCCCTTAAAATGGAGGCAGTCGTTTGAGAACCTGCTGTCCAACCAACATGGACTGTGCTTGTTCAGAGCTTTCCTGGTGTCAGAGTTTAGTGAGGAGAACATAGCTTTCTACCTGGCCTGTGAAGACTACAGGATAACCAAGCCCTCCTCAAAGCTATCCGCTAAGGCTAAGAAAATCTATGAGGAGTATGTCTGCAGTGACGCACCAAGAGAGGTCAACCTAGACCATGAGACCAAAGCCATCACCAAGAAGAACCTGGAGCGCCCCAGCCAGTCCTGTTTCAGCCTGGCCCAGGAGAAGATCTACGCCCTGATGGAGAAAGACTGCTACCCTCGCTTCCTCAAGTCCATCACCTACCTGGAGATCAGTCGGCAGGTCAAAGCCGGTTAAGACCATTTAAGGCTGGTTAATGCTGGTTGATGCTGGTTATGGTTGGTTATGGCCCACTGCAAGTGGCGAATGGGACACAAAGGAGACGTCTATAGGAAACAAGCTGAAAAGCACACACTGGAAACCAGGTAGCCTCACTAGGTTCCTCCTCAGTACTGATTGGTCAGAAGTATGGAGGGGCAACTGGAGATGAATGTTGGACTGGAAGTCAGTCAGAATCAAGACTGGAATTCTTGTCCTGTGGCCTGGGAAAGAGCCTCGCTCAATGTGAAGATTGAGGTATTGAGGTTTGCAAAAGGTGAACCTGTGTCTTGAAGTCAAGGACACACCAAGAGGTTCCTGTTCACGGATTTTTGAGTAGAAAGAAGAATGAGATGGAAAAGGACTGCTTTGCACAATCACTGATGGAGAAGCTGTTATAGTTTTGTATTATCCGATGCTTTAATTTGTctatttatttctgtatttattagcatttatttatttgtttctaCTGTGCAACTGTTCGACTTAGATTGTAATATTTATGCAtatattttaatgttttttttcttcacagaATTCCTTATGTGACAGAATTATTTTTGGAAATAAAATGTAACTATATGAAACATAA

Function


NR:

description
regulator of G-protein signaling 5-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021612802.2 True 1274 mRNA 0.44 5 50791220 50793594
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Neighbor


gene id symbol gene type direction distance location
LOC110530034 LOC106568730 coding downstream 23309 50740976 ~ 50767911 (-)
LOC110530033 LOC106568728 coding downstream 61286 50716128 ~ 50729934 (-)
hsd17b7 LOC106568727 coding downstream 80799 50690347 ~ 50710421 (-)
LOC110530028 LOC106568726 coding downstream 105962 50678172 ~ 50685258 (-)
LOC110530027 LOC106568725 coding downstream 116903 50665631 ~ 50674317 (-)
LOC110530036 LOC106568732 coding upstream 40946 50834540 ~ 50848805 (-)
LOC110530040 LOC106568735 coding upstream 238971 51032565 ~ 51067801 (-)
LOC110530042 kcnt2 coding upstream 334020 51127614 ~ 51189612 (-)
LOC110530043 LOC106568739 coding upstream 458761 51252355 ~ 51259061 (-)
LOC110530045 LOC106568741 coding upstream 522700 51316294 ~ 51323600 (-)
G719069 NA non-coding downstream 52904 50736259 ~ 50738316 (-)
G719068 NA non-coding downstream 56687 50734077 ~ 50734533 (-)
G719056 NA non-coding downstream 76286 50714582 ~ 50714934 (-)
G718931 NA non-coding downstream 77213 50688240 ~ 50714007 (-)
G719114 NA non-coding upstream 25188 50818782 ~ 50818987 (-)
G719202 NA non-coding upstream 161875 50955469 ~ 50957241 (-)
G719208 NA non-coding upstream 205800 50999394 ~ 51075009 (-)
G719250 NA non-coding upstream 288139 51081733 ~ 51082025 (-)
LOC110530011 LOC106568709 other downstream 901968 49866272 ~ 49937001 (-)
G718489 NA other downstream 953524 49785674 ~ 49837696 (-)
G716488 NA other downstream 2002258 48788521 ~ 48788962 (-)
G716480 tnk2 other downstream 2008705 48782121 ~ 48782515 (-)
G716463 LOC106591423 other downstream 2030057 48759912 ~ 48761163 (-)
G719151 NA other upstream 143334 50936928 ~ 50939471 (-)
G721275 NA other upstream 1967445 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 2669588 53462034 ~ 53478913 (-)
G722459 NA other upstream 2704554 53495804 ~ 53499730 (-)

Expression


LOC110530035(LOC106568731) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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LOC110530035(LOC106568731) Expression in each Bioproject

Bar chart with 21 bars.
LOC110530035(LOC106568731) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network