LOC110530037 (LOC106568733)


Basic Information

Item Value
gene id LOC110530037
gene name LOC106568733
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50933532 ~ 50939589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612805.2
TGCGGTAAACTCAGTAGTTCACCTAGGTCAGGAAGCCGTGTGAAAGGTACAGGGGAAATATTTTAGCTATGCGAAGCTTTAAAAAGAGATGTGGTACAAACGATGGGGTTAAACGAACACTAAGAGCTGCTCGTGGTCTGCCTTCACAAATGCTAAAGTTAGAAGGAAGCTAGCATGGAGACATTTGTTTTTCTATTTCCTCAATTCAACTTTTTGGCCCCAAAGGAGGAAGCGTATTTCAAAATGCTTGGTCCTAAGGACTTGAAGGCACCGAGAATGAAAGATAGTAATTCCAGATTGAAAGACAAGAGGTGCCAACTGAGCCTTCTGCTGACCAAGTCAGGCTCCCATGAAAACATCAGTCCAGAAAAGAAGACCACCACCGCAACCAGCAACATCTCACCGGAGGCAGCTCTGAGTTGGAGTAGCACCTTTGAAGAGCTGCTCAGACATTCAGATGGAGTGGAGACGTTTTCTCAGTTCCTCAGAACAGAGTTCAGTGAGGAGAACATTGAGTTCTGGTTGGCCTGTGAGGAATACAAGACCATCGACTCGGATTCCAGGCTCATCACCAAAGCCAAGCAGATGTATGCTGTCTTCATTGAAGCCGATGCCCCAAAGGAGGTCAACATCGACTACGCAACAAAGGTGGCCATCCAGAAGACCATCACCACGCCGACGAATACCTGCTTCGATGCGGCACAGAGCAAAGTCTTCAGCCTGATGAAAAAAGACTGCTACCCGAGGTTCCTCACTTCCGAAATCTACCTTCGCCTCACCAAGAGAAAAGGCCCCGGGACCACCATGTTCCGCCGGAGGTCACGGTCCTGCGTTTTCAATGAGCCGCGAGGGGAGGCCACGGGCGACTCCTCTGCCTGGTTGTAGAATCTTAAACTGAGAGtagcacaaaacacacacacacccttctgaTTTCTCTTGCAGTGCAATGCCTGTATCTGACTCGCTGTGTGACTCGTTGTTGTGTTTTTTAATGAGACTTTCTGAAGAGATTTGACTTTACAGCTATCAGTTAAAGTGTTCCCCATCTAGACACAGAATACTGTGTTCGAATACTAATATGCAACGTTCATCTTGATTACCGTTAAATGTCTTGCCACTGCTTGTATTAATTCAATAATTTATGATAATAATCTGTTATGTTGGCTTTTAGTTGTAAATTGTATATATAGTCTGGAGAGTAATTATTGGAATAAACAATGTACTATTAAAG

Function

NR:

description
regulator of G-protein signaling 21-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612805.2 True 1231 mRNA 0.45 5 50933532 50939589

Neighbor

gene id symbol gene type direction distance location
mier1b LOC100380719 coding upstream 267908 50648718 ~ 50665624 (+)
LOC110530024 LOC106568723 coding upstream 292349 50607401 ~ 50641183 (+)
LOC110530023 LOC106568722 coding upstream 354671 50443704 ~ 50578861 (+)
LOC110530022 LOC106568721 coding upstream 491575 50434935 ~ 50441957 (+)
LOC110530019 LOC106568718 coding upstream 536525 50384296 ~ 50397007 (+)
LOC110530926 LOC106568801 coding downstream 3536 50943125 ~ 50944659 (+)
LOC110530038 LOC106568734 coding downstream 15819 50955408 ~ 50957451 (+)
LOC110530039 NA coding downstream 50459 50990048 ~ 50995826 (+)
LOC110530041 cdc73 coding downstream 62378 51001967 ~ 51066824 (+)
LOC110530928 LOC106568738 coding downstream 274838 51214427 ~ 51239797 (+)
G718279 LOC106568732 non-coding upstream 84733 50847528 ~ 50848799 (+)
G718255 NA non-coding upstream 114684 50818507 ~ 50818848 (+)
G718218 NA non-coding upstream 132526 50800796 ~ 50801006 (+)
G718231 NA non-coding upstream 151949 50781319 ~ 50781583 (+)
G718200 NA non-coding upstream 197932 50735382 ~ 50735600 (+)
G718357 NA non-coding downstream 20604 50960193 ~ 50960416 (+)
G718363 NA non-coding downstream 25859 50965448 ~ 50965647 (+)
G718368 NA non-coding downstream 30094 50969683 ~ 50971478 (+)
G718058 NA non-coding downstream 37652 50977241 ~ 51075015 (+)
G718395 NA non-coding downstream 70124 51009713 ~ 51051623 (+)
LOC118965615 NA other upstream 1079340 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 1386447 49546212 ~ 49547085 (+)
G716862 NA other upstream 1599760 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 2437643 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 2730807 53670348 ~ 53674103 (+)
rps28 NA other downstream 2986628 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 3684585 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 4194441 55120291 ~ 55136638 (+)

Expression


Co-expression Network