LOC110530926 (LOC106568801)


Basic Information

Item Value
gene id LOC110530926
gene name LOC106568801
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50943125 ~ 50944659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986872.1
ATGGATCTCAACGCTCTTTTCAAGGGTAGATTTTGTTGCTTTCTCAAGGACCCACTTGAAGAGGCTGAGACTTGGGGAGAGTCTGTGGACAAACTCCTGTGTAGTAAACCTGGGCAGGCAGCTTTCCGACAATTCCTGAAGTCAGAGTATAGTGAGGAGAATATCCTGTTTTGGCTGGCCTGTGAGGACTACAAGAAGATCAAGTCTCTTCCAGAGATGATCTCCTCTGCAAACAGGATCTACTCTGAGTTTGTGGAATGTGAAGCACCCAGACAGATCAACATTGATTGTGGGACCAGAGAAAATATCACCAAGAACATCTCCCAGCCGAGCCTGACTTCCTTTGACGCGGCACAGAAGCTGATCTACAGTCTGATGGCCAGGGATTGTTACCCACGATTCCTCAAGTCAGACATCTACCAGGATTTGCTTCGGAGAGCAGATGCAAGGTGACTCTCTTAAATGACAAACGCTCTAAGTGTTTCTCAACGTTTTATGTACCACACACAAGCTATAGTCCCTCCATCCATGGAGGACCACTTTGATTAAAGGgatggttttatttattttttaccttatTTTCGACTTACCTAGGGTGTTGCCACCTAGGGTTTAGTTTAGCAACGTCCAGAATCTCCTGGCTAGACTGTTTTTAAACGTAGCAATGCACGTGGAAATGGATTGTATCGTTCCTTAAAACTAGCACCTGAGAACTGACTAAAATGGCCACCAGCTCACCATTTAACCAGGAACTGGTCAAGAACAACCCAGAAGTTGAGAAACACATTCTTTCAACTCTTTCATCTACGCTATGCTTACCATGTTATTGCAATCCATGTCCAAACAACATATTTTCTTTAACCGGTGACTACATTTAATGGGTTGATTCCATTCTCAATGAATGTATATAGTATCATGTGTGCAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986872.1 True 926 mRNA 0.43 3 50943125 50944659

Neighbor

gene id symbol gene type direction distance location
LOC110530037 LOC106568733 coding upstream 3536 50933532 ~ 50939589 (+)
mier1b LOC100380719 coding upstream 277501 50648718 ~ 50665624 (+)
LOC110530024 LOC106568723 coding upstream 301942 50607401 ~ 50641183 (+)
LOC110530023 LOC106568722 coding upstream 364264 50443704 ~ 50578861 (+)
LOC110530022 LOC106568721 coding upstream 501168 50434935 ~ 50441957 (+)
LOC110530038 LOC106568734 coding downstream 10749 50955408 ~ 50957451 (+)
LOC110530039 NA coding downstream 45389 50990048 ~ 50995826 (+)
LOC110530041 cdc73 coding downstream 57308 51001967 ~ 51066824 (+)
LOC110530928 LOC106568738 coding downstream 269768 51214427 ~ 51239797 (+)
LOC110530044 LOC106568740 coding downstream 327587 51272246 ~ 51312687 (+)
G718279 LOC106568732 non-coding upstream 94326 50847528 ~ 50848799 (+)
G718255 NA non-coding upstream 124277 50818507 ~ 50818848 (+)
G718218 NA non-coding upstream 142119 50800796 ~ 50801006 (+)
G718231 NA non-coding upstream 161542 50781319 ~ 50781583 (+)
G718200 NA non-coding upstream 207525 50735382 ~ 50735600 (+)
G718357 NA non-coding downstream 15534 50960193 ~ 50960416 (+)
G718363 NA non-coding downstream 20789 50965448 ~ 50965647 (+)
G718368 NA non-coding downstream 25024 50969683 ~ 50971478 (+)
G718058 NA non-coding downstream 32582 50977241 ~ 51075015 (+)
G718395 NA non-coding downstream 65054 51009713 ~ 51051623 (+)
LOC110530019 LOC106568718 other upstream 549289 50384296 ~ 50397007 (+)
LOC118965615 NA other upstream 1088933 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 1396040 49546212 ~ 49547085 (+)
G716862 NA other upstream 1609353 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 2432573 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 2725737 53670348 ~ 53674103 (+)
rps28 NA other downstream 2981558 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 3679515 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 4189371 55120291 ~ 55136638 (+)

Expression


Co-expression Network