LOC110530038 (LOC106568734)


Basic Information

Item Value
gene id LOC110530038
gene name LOC106568734
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 50955408 ~ 50957451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612806.2
ACGCTACACACACTAACATCACAGTAGCCGTCGCTTGTATAAAGGAGGGTGTTTGGAGGACTGTCAAAACAGACACAATTTGACAAGCTAGCAGAGAACTCCAACACTGAGTAATACATACAAAGAACCCAATGATCGTGTTCCCCCAAACATGCTTATCTTAGTCACATCACCATCAAGGGAACTGCATCCACTCAACATTGACATGGAGGACAACAGAAGAAAGCAGACAAAGGGATGCGACTTGAGGTCCCGACTACAACGCAGATCTTCCCATGCCCCTAACACTGAACGACTTAGTACTGAGGAAATTATCCTGTGGTCCCAGTCTTTGGAGAGACTTCTCACATCAAAATATGGCATGGCAACATTTCAGGCCTTTCTGAAATCAGAGTTCAGTGATGAGAACATTGAATTCTGGCTGATCTGTGAAGACTACAAGAAGATTAAGTCCTCCTTCAGGCTGTCCTCCAGGGCCAAGAAGATCTACAAGACATACATTGAAGCTGAGGCTCCGAAAGAGATCAACATTGACCACAAGACCAGAGATCTCATCGGGCAGAATGTGAAGACGCCCTCCACAGTTTGCTTCGACGAGGCCCAGAGGATTGTGTACAGCCTGATGGAGAAAGACTCCTACCCCAGGTTCCTCAGATCCAACATCTACAGGACCCTATTGGACTCCGCATCAGACTACACAAAGATGTGAATGAATACCGATGATAGAAACTGAACTGAGGCTTCCAACAATGGACTGCAATGTTTCACAGCCAGGGAGCTTCTTACAAACAGGATTCATAAGAAGATGCTTCCGAGTGTGAATTATACTGGGTACAGATGTACGAGGCCTAAGGGAATGCTGGGAGGAACATACAGAAGTGACTGTGCTGGCAAGCCTTCTTGACATTTGTGTTTAGTCTATGTGCTTTCACTTGAAAGAGGAACATATGTCACATAGAAGGGGACTAAAGAGATCATAGAAATAAAGTgttgattctatttctatgacagAGACATGGTGGTGTCAGGGGATTACCATGCATGGCATGTTATTGCTAGGGACTTTCTGTGTCAAAGTTCCGGGGATGTTTACTATGTAGGATCTAAACAGTCAGGGCTGTAACTGTATGAGAAGGTATCTGCAGTTGCACATAATCTGCAGGTCATCAGTTGAGTTATAAGGCATTTGATAAAATAATCTACTaaatttgacttttttttttaagccACAATTTTAGAATGGGTAATTTTGTTTACTTTAACACAATGAGGCATGTTTGTGATGTAAGCTTTAAAAAATAACATTATGGAGAATTGATTTTGTGAAGAAAAATGCTGTCGATACACTGGATATTTGTGAAAAATTCAGATTTCTATAGGTGTATTTATAAAATGGCCCATGGTTTCCAAATT

Function

NR:

description
regulator of G-protein signaling 21-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612806.2 True 1413 mRNA 0.42 5 50955408 50957451

Neighbor

gene id symbol gene type direction distance location
LOC110530926 LOC106568801 coding upstream 10749 50943125 ~ 50944659 (+)
LOC110530037 LOC106568733 coding upstream 15819 50933532 ~ 50939589 (+)
mier1b LOC100380719 coding upstream 289784 50648718 ~ 50665624 (+)
LOC110530024 LOC106568723 coding upstream 314225 50607401 ~ 50641183 (+)
LOC110530023 LOC106568722 coding upstream 376547 50443704 ~ 50578861 (+)
LOC110530039 NA coding downstream 32597 50990048 ~ 50995826 (+)
LOC110530041 cdc73 coding downstream 44516 51001967 ~ 51066824 (+)
LOC110530928 LOC106568738 coding downstream 256976 51214427 ~ 51239797 (+)
LOC110530044 LOC106568740 coding downstream 314795 51272246 ~ 51312687 (+)
ephb3a LOC106568743 coding downstream 462281 51419732 ~ 51465235 (+)
G718279 LOC106568732 non-coding upstream 106609 50847528 ~ 50848799 (+)
G718255 NA non-coding upstream 136560 50818507 ~ 50818848 (+)
G718218 NA non-coding upstream 154402 50800796 ~ 50801006 (+)
G718231 NA non-coding upstream 173825 50781319 ~ 50781583 (+)
G718200 NA non-coding upstream 219808 50735382 ~ 50735600 (+)
G718357 NA non-coding downstream 2742 50960193 ~ 50960416 (+)
G718363 NA non-coding downstream 7997 50965448 ~ 50965647 (+)
G718368 NA non-coding downstream 12232 50969683 ~ 50971478 (+)
G718058 NA non-coding downstream 19790 50977241 ~ 51075015 (+)
G718395 NA non-coding downstream 52262 51009713 ~ 51051623 (+)
LOC110530019 LOC106568718 other upstream 561572 50384296 ~ 50397007 (+)
LOC118965615 NA other upstream 1101216 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 1408323 49546212 ~ 49547085 (+)
G716862 NA other upstream 1621636 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 2419781 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 2712945 53670348 ~ 53674103 (+)
rps28 NA other downstream 2968766 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 3666723 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 4176579 55120291 ~ 55136638 (+)

Expression


Co-expression Network