Item | Value |
---|---|
gene id | LOC110530040 |
gene name | LOC106568735 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 51032565 ~ 51067801 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021612807.2 | False | 2330 | mRNA | 0.52 | 2 | 51032565 | 51038079 |
XM_021612811.2 | False | 2176 | mRNA | 0.52 | 2 | 51032565 | 51038079 |
XM_021612808.2 | False | 2314 | mRNA | 0.50 | 2 | 51032565 | 51067619 |
XM_021612810.2 | False | 2477 | mRNA | 0.50 | 3 | 51032565 | 51067620 |
XM_036985599.1 | False | 1973 | mRNA | 0.51 | 2 | 51032565 | 51067801 |
XR_005052895.1 | False | 1147 | mRNA | 0.40 | 2 | 51066307 | 51067649 |
TU817159 | True | 3361 | lncRNA | 0.44 | 2 | 51055396 | 51067386 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530036 | LOC106568732 | coding | downstream | 183760 | 50834540 ~ 50848805 (-) |
LOC110530035 | LOC106568731 | coding | downstream | 238971 | 50791220 ~ 50793594 (-) |
LOC110530034 | LOC106568730 | coding | downstream | 264654 | 50740976 ~ 50767911 (-) |
LOC110530033 | LOC106568728 | coding | downstream | 302631 | 50716128 ~ 50729934 (-) |
hsd17b7 | LOC106568727 | coding | downstream | 322144 | 50690347 ~ 50710421 (-) |
LOC110530042 | kcnt2 | coding | upstream | 59813 | 51127614 ~ 51189612 (-) |
LOC110530043 | LOC106568739 | coding | upstream | 184554 | 51252355 ~ 51259061 (-) |
LOC110530045 | LOC106568741 | coding | upstream | 248493 | 51316294 ~ 51323600 (-) |
LOC110530046 | LOC106568804 | coding | upstream | 310103 | 51377904 ~ 51380863 (-) |
mfsd8l2 | LOC106568744 | coding | upstream | 428279 | 51496080 ~ 51516909 (-) |
G719202 | NA | non-coding | downstream | 75324 | 50955469 ~ 50957241 (-) |
G719114 | NA | non-coding | downstream | 213578 | 50818782 ~ 50818987 (-) |
G719069 | NA | non-coding | downstream | 294249 | 50736259 ~ 50738316 (-) |
G719068 | NA | non-coding | downstream | 298032 | 50734077 ~ 50734533 (-) |
G719250 | NA | non-coding | upstream | 13932 | 51081733 ~ 51082025 (-) |
G719252 | NA | non-coding | upstream | 16442 | 51084243 ~ 51084510 (-) |
G719253 | NA | non-coding | upstream | 16713 | 51084514 ~ 51084723 (-) |
G719255 | NA | non-coding | upstream | 27575 | 51095376 ~ 51095650 (-) |
G719262 | NA | non-coding | upstream | 37846 | 51105647 ~ 51105861 (-) |
G719151 | NA | other | downstream | 93094 | 50936928 ~ 50939471 (-) |
LOC110530011 | LOC106568709 | other | downstream | 1143313 | 49866272 ~ 49937001 (-) |
G718489 | NA | other | downstream | 1194869 | 49785674 ~ 49837696 (-) |
G716488 | NA | other | downstream | 2243603 | 48788521 ~ 48788962 (-) |
G716480 | tnk2 | other | downstream | 2250050 | 48782121 ~ 48782515 (-) |
G721275 | NA | other | upstream | 1693238 | 52761039 ~ 52761451 (-) |
LOC110529122 | LOC106568971 | other | upstream | 2395381 | 53462034 ~ 53478913 (-) |
G722459 | NA | other | upstream | 2430347 | 53495804 ~ 53499730 (-) |
G722602 | NA | other | upstream | 2735642 | 53803443 ~ 53856065 (-) |