Item | Value |
---|---|
gene id | LOC110530045 |
gene name | LOC106568741 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 51316294 ~ 51323600 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
UAP56-interacting factor-like isoform X3 |
id | name | namespace |
---|---|---|
GO:0006406 | mRNA export from nucleus | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0003729 | mRNA binding | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036985600.1 | False | 2904 | mRNA | 0.44 | 9 | 51316294 | 51323226 |
XM_021612821.2 | False | 2931 | mRNA | 0.45 | 9 | 51316294 | 51323599 |
XM_021612822.2 | False | 2929 | mRNA | 0.44 | 9 | 51316294 | 51323600 |
XM_021612823.2 | False | 1268 | mRNA | 0.54 | 10 | 51317992 | 51323600 |
XM_036985601.1 | True | 1265 | mRNA | 0.54 | 10 | 51317992 | 51323600 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530043 | LOC106568739 | coding | downstream | 57233 | 51252355 ~ 51259061 (-) |
LOC110530042 | kcnt2 | coding | downstream | 126682 | 51127614 ~ 51189612 (-) |
LOC110530040 | LOC106568735 | coding | downstream | 248493 | 51032565 ~ 51067801 (-) |
LOC110530036 | LOC106568732 | coding | downstream | 467489 | 50834540 ~ 50848805 (-) |
LOC110530035 | LOC106568731 | coding | downstream | 522700 | 50791220 ~ 50793594 (-) |
LOC110530046 | LOC106568804 | coding | upstream | 54304 | 51377904 ~ 51380863 (-) |
mfsd8l2 | LOC106568744 | coding | upstream | 172480 | 51496080 ~ 51516909 (-) |
LOC110530051 | LOC106568746 | coding | upstream | 201667 | 51525267 ~ 51546934 (-) |
LOC110530052 | LOC106568747 | coding | upstream | 237200 | 51560800 ~ 51582355 (-) |
LOC110530053 | LOC106568748 | coding | upstream | 259925 | 51583525 ~ 51591883 (-) |
G719762 | NA | non-coding | downstream | 2757 | 51313308 ~ 51313537 (-) |
G719761 | NA | non-coding | downstream | 3620 | 51311889 ~ 51312674 (-) |
G719702 | NA | non-coding | downstream | 87623 | 51228401 ~ 51228671 (-) |
G719701 | NA | non-coding | downstream | 87992 | 51228088 ~ 51228302 (-) |
G719697 | NA | non-coding | downstream | 91529 | 51224529 ~ 51224765 (-) |
G719767 | NA | non-coding | upstream | 4606 | 51328206 ~ 51328432 (-) |
G719835 | LOC106568743 | non-coding | upstream | 115354 | 51438954 ~ 51439395 (-) |
G719841 | LOC106568743 | non-coding | upstream | 121620 | 51445220 ~ 51445520 (-) |
G719842 | NA | non-coding | upstream | 123139 | 51446739 ~ 51446984 (-) |
G719151 | NA | other | downstream | 376823 | 50936928 ~ 50939471 (-) |
LOC110530011 | LOC106568709 | other | downstream | 1427042 | 49866272 ~ 49937001 (-) |
G718489 | NA | other | downstream | 1478598 | 49785674 ~ 49837696 (-) |
G716488 | NA | other | downstream | 2527332 | 48788521 ~ 48788962 (-) |
G721275 | NA | other | upstream | 1437439 | 52761039 ~ 52761451 (-) |
LOC110529122 | LOC106568971 | other | upstream | 2139582 | 53462034 ~ 53478913 (-) |
G722459 | NA | other | upstream | 2174548 | 53495804 ~ 53499730 (-) |
G722602 | NA | other | upstream | 2479843 | 53803443 ~ 53856065 (-) |
G722670 | NA | other | upstream | 2602628 | 53926228 ~ 53927959 (-) |