mfsd8l2 (LOC106568744)


Basic Information

Item Value
gene id mfsd8l2
gene name LOC106568744
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 51496080 ~ 51516909 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612828.2
ACGCTACACCCATAAACCATTACTAAGAGGGCAATTTTCTACGTATACTGTAGCTAGTAGCCTAGGGTTACAGTAGCACTTACTTAACCTGGATGGCTATTTTAAAGCATTGCTTGTGTATATGCATTTTGGTCTGGAGTGGCGTGTTTACAATGAAATGAGAGCTGTCTATAATGAATAATAGATATCATGTCCTGTGTGCTTTACCTCACCTTGTAACACAAAACAGCAGAAGAAGAACATTGGCTATACCTGCAGTGGCATATGCAGAGCTCAGGCTTTAGGCAGTGATCTACAGTCTCCAATATTCTTGGTCaacctgctgccaatgactgaaaacAAACTGAATtttccttcaggcatttgaagTGATGCCGCTCGTCTGGGATATTTACTAATGGGATTATAGTGGTTCATGGAGGACAAAAGACTCTGGGGGATATGCTGATAAGGCCTATCGGGTTTTTACCAGCTGTCGAGGATGCTGTAGTACCTACCTGTGGGGGCAACTACATGTGGGGCAAATGAGAGTTTCGAAGCGACCAAATGCAACTTTATTCCGAAAATACAGTGGAGCACATTCCAATGTTTACCAAGGGGAAATAGGCTTGATTGGAGTCATCATCCTCTTGTTTGCTTAATCTAATTTGATAAATTTGTCCCTGAACGATATGAGGAGGCAAACGTTGATGTGCCATAGCCAGAGAAGTCATTTTAGGTGATGGATTATCGTCAGAAGAAGAATTGTACTTTTTTCACTATTGGATTGATATTTCTGTTAAGTGGCATTGAGTACGctgtcaTCCTCCCTACAATATGGAGGTATCTCCAGATTTTGGAGGCACCTCCATACTTCCTGGGTCTGGGCTTGTCTGCGTTCAGTCTGAGTGGGCTGCTGACAGGCCCACTGTTCGGCCTCTGGTCCGACCGGACCCGAACTACAAAGACCATCATCCTATACTCCAACGTTTTTGAGATTGTTGGTAGCTTCATGTATTTTATGGGATACTCAAAATGGCTGTTGTTGTGCAGTCGACTTGTAGCAGGTGAGACAAATACAAATTCTGGAGTGTTTGTGGTTTTCTGTTGTTGTGCTGTAGGCCTATAGCCACTCATTTAAACGCTAAGTGAATTATTTAcaattgtctgtgtgtgtgtgtgtgagaaagtgatagagagagagatgaatggcATCCCAATGTTACGGTCCTGATATCATACAGCCTTTGATTTGGTCACACAATCTAGACCTATTTAATACACGTGTTGATGCCTTCCAGGTATTGGTGCAGGAGCAGGCTCCTCCATCTTTGGCTTCCTCACACGGAGCACCCGGCCAGAGGAACGCGCTGGTGTTTTCGCTGCCATCATGGCATGTCGCCAAGCTGGCCTCCTGATTGGGCCAGCATTCAATTTGTTCCTGAGGCTGTGCGACTTCCAGCTGGGGCCATTTGTGGTGAACAACTACACCTCTCCCGGGaTCTTCATGTGTCTGATGTGGATCCTGCTCCAGTTTGTGGTGCTGGCCCTGTACTGGGACATACCACCTATCAGCTCCGAAGAGGGGGGTATCGCTGTGGGAGAGATCGAAGAGGAGGAGCCGCTGGTAAGGGCAGAGGAGACACTGGAGACCTACGGCACTGTCTGGGACGACCAGATAGAGACAACCCTTTCCTCAGAGATACACCATTTCCAGGACCCTTCACAGTGCCCTCCCTCGCCGCCTTACTCTACCTCTTCCTCGTCCCCTCCTTCGACTATCTCAAACCCCCTCACAATTTTCAGTGCTAGTCAAGAGTTTctgagggaggaggtggtggtgctcCTCACTGCACAGTTCATCACCCTCTTCAACCAGACAGCACTGGAGACCATGGTGACACCTCTGACCCAGCGCTCCTTTGGCTTCGGAGAGCTTGCCAACAGCCTGATGTACAGCCTGTGTGGCGTTGAGGTGATCCTGGGCTTCTTCTTGGTGCGTGGGCTGAGTCGCCAGGTGGAAGACCGTGTGGTGCTGGCCGTGGGGCTGGTCATCTGCAGTGTTGCCTGCGTCTGGTGCCTCATCTTCCTGGCCAACCCCCAGGGCGGGTACTCCTGGGAGTTGGCAACGTTCATCATCGGAGTGTTCCTGCAGCTGCTCGGGCTTCCCTTCGTGGCCGTGTCCCAGGTGTCTCTCTTCTCCAAAGTCACTGCAGAGAAAACGCAAGGGTTCAGTCAAGGCGTGAGGCGCTCTGTTGGGGGGCTGGCTACTATCCTGGGGCCTCTCTGGGCTGGAGGACTGACCGGTAACTTGTACCTGATGCTTGGAGTGATGCTGGCTCTTCTCCTCATGATCACAGTGATGCTGATACTATCCTATGATCGCCTAGTCGAACCCAAAGTAGTGCAGCACGCCCAGAGCTCAGACAATGGAGAATAGACAAGAGTCATGTTCAGTAGGGAGAAAATGTTTTGAAATGGGGAGGCAtgacctgaacttgtccaataagagcACAGCTTCTGGGTTTCCGTTGCAACGCATATTGCTACGGGTATGCACTACTGAACACGTCCCTGCTGTCAACTTGAATGACAACTGAAGCCCTAATAAAGGTCAAAGGTGAGGTGATGTGACACATACAGTGTGTCTCCCAACTACTATGAGAAGGTCAATGAATGCACATTACAATAAAGGTGGCGTGTGTCTAAACTCTGCAATGCAGCAGAGATCCAACCAATGACCTAGAGGCTAATCCAACCCACTTTAAAGCTCTGTGGAGTCTATTTTACgttcacactttatttggatagtccagtcatactatcaacaaagtatctgttgataagcaactttctaaatgtttttatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgtgacctggccaagattaagcaaagcagttcgacacatacaacaacacagagtcacacatggGATAagcaaacatacaatcaataatagagtagaaaaatctgtatacagcaTGTGCATATGAGGTAGGattaagggaggtaaggcaataaatacttCTTGCTAAGGttgttgttagggttaggtttagaataagggctaaggttagggttagggctagggttaagattagggttagaaATAGGTTCAGGGTTAGTACATAGTTAGTTGAAACGTTACtgagtctgtagagcatctacagatggactattcAAATAAAGTGTTGCCCATTTTCCTATCCCAACATGAATCTTTGCACATTTTAGCAAACTTCTTTGAAATATTGTTGCttgtagtgtttctgtagtagATAGAATATTTCATATCTACCAAAAGACGTATACATAAATATATAACATGGTATTACGGATGTACACAAGGGGGCACCGTTCCTCTCTGTTTGAATATTTTGGAATGATGTAATTGATGTTGAATAAATCAAGTTTTCAAAA

Function

NR:

description
PREDICTED: major facilitator superfamily domain-containing protein 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612828.2 True 3451 mRNA 0.46 10 51496080 51516909
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110530046 LOC106568804 coding downstream 115217 51377904 ~ 51380863 (-)
LOC110530045 LOC106568741 coding downstream 172480 51316294 ~ 51323600 (-)
LOC110530043 LOC106568739 coding downstream 237019 51252355 ~ 51259061 (-)
LOC110530042 kcnt2 coding downstream 306468 51127614 ~ 51189612 (-)
LOC110530040 LOC106568735 coding downstream 428279 51032565 ~ 51067801 (-)
LOC110530051 LOC106568746 coding upstream 8358 51525267 ~ 51546934 (-)
LOC110530052 LOC106568747 coding upstream 43891 51560800 ~ 51582355 (-)
LOC110530053 LOC106568748 coding upstream 66616 51583525 ~ 51591883 (-)
si:dkey-18p12.4 LOC106568750 coding upstream 131629 51648538 ~ 51689345 (-)
eif4a2 LOC106568752 coding upstream 225305 51742214 ~ 51751447 (-)
G719854 NA non-coding downstream 29852 51465976 ~ 51466228 (-)
G719842 NA non-coding downstream 49096 51446739 ~ 51446984 (-)
G719841 LOC106568743 non-coding downstream 50560 51445220 ~ 51445520 (-)
G719835 LOC106568743 non-coding downstream 56685 51438954 ~ 51439395 (-)
G719930 NA non-coding upstream 71043 51587952 ~ 51588192 (-)
G719970 NA non-coding upstream 123460 51640369 ~ 51640659 (-)
G719981 NA non-coding upstream 165222 51682131 ~ 51686715 (-)
G719992 NA non-coding upstream 189548 51706457 ~ 51706712 (-)
G719151 NA other downstream 556609 50936928 ~ 50939471 (-)
LOC110530011 LOC106568709 other downstream 1606828 49866272 ~ 49937001 (-)
G718489 NA other downstream 1658384 49785674 ~ 49837696 (-)
G716488 NA other downstream 2707118 48788521 ~ 48788962 (-)
G721275 NA other upstream 1244130 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 1946273 53462034 ~ 53478913 (-)
G722459 NA other upstream 1981239 53495804 ~ 53499730 (-)
G722602 NA other upstream 2286534 53803443 ~ 53856065 (-)
G722670 NA other upstream 2409319 53926228 ~ 53927959 (-)

Expression

mfsd8l2(LOC106568744) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
End of interactive chart.

mfsd8l2(LOC106568744) Expression in each Bioproject

Bar chart with 18 bars.
mfsd8l2(LOC106568744) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
End of interactive chart.

Co-expression Network