cmpk (LOC106568761)


Basic Information

Item Value
gene id cmpk
gene name LOC106568761
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52053382 ~ 52059723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612862.2
CAAACGCGGAAGTGGTGTTGCTTTGGCGGACTTCCCACTGACACGCAACAACCGGGCATTAGATCTGTTCTTCATCGAACCGGGTTCACTTAGTGTATTGTTTGGTTTGTCGGTTTATGATTTTCCATTTATTGAGTAGGTTATCAGTGAAGGTGCCGAGCGTTGTGTACAGGGCCGCATTGATCATGAAGCCGCAGGTTGTGTTCGTGTTGGGAGGGCCTGGGGCGGGGAAAGGGACCCAGTGTGCCAGAATCGTTGAGAACTACAGTTACACTCACCTGTCTGCCGGAGACCTGCTGAGGGCCGAGCGAAGCCGAGAGGGGTCAGAGTTCGGACAGCTCATTGACAGTTACATCAAGGATGGCAAGATCGTCCCTGTCGAGATCACCATTAACTTACTCAGGAAGGCCATGGAGGAAACCATGGAGATGGACGAGAAGAAGTTCCGCTTCCTCATCGACGGCTTCCCCCGAAATGAAGACAACCTCCAGGGGTGGACCACTGTCATGGAAGGGAAGGCTAACGTCAAATTTGTGCTTTTCTTCGACTGTACTAGTGAGGTCTGTATCGACCGATGTCTAGAAAGAGGGAAGAGCAGCGGGCGCACCGATGACAACAGAGCGAGCCTGGAGAAAAGGATCCAGACATACCTGCAGTCGACACGGCCTATCATCTCACTGTATGAGAAACAGGGCAAGGTGCGCACCGTGGATGCCTCGTGCGGTGTGGACGAGgTTTTTGACAACGTCAAAGCCATCCTGGACAAAGAGGGTTGAAATCCCCGCCAACTGCCAACAACTGTAACATTCACAGTTACGTTTTGTTTGTCTTTGTATCAACTGCAGCAACACTATACTCAGTTTACATGTCCATTCAAATtactttttacatttaaaaaaacaaaacatttttttgtcaGTGCCGAGCTGCTCTTCCAAGGGTGTGATTGAATGTGTGTGTAAGAGTGAATAAGATGGGTAGTAAGATGCTCTACTGACCAACCGCACTGGGTTTCACTACGGTAGTTGTACACCAACTGACAAGCCTGTCATTGTAGTCGTGGGGCTTTGTATACGGACAAGACTAATAGAATTGCTCTTAGCTTGGCGAGGCActtatttatgtatgtatgttaaattaatgtttttttttgttgttgtgatcaAATCTGCGTACACACCATTGTTAGCCGTTCCCTAAGCGAAAACGTGCATTTTCACCGACCAACCAATTCTATGGACTAAATCAGAGCTCTCCATccgtgttcctggagagctaccatcctgtccattttcactccaaccccagttatAACTAACCTTATTCAGTTTATTAACCAGCTAATTAGATCAGGGGGGGCGCCAGGACCGAGTTGGGAAACCTTGTGTTAGATTGGGGTTGGactgaacctacaggacggtagagcTCGAGGAACAGGTACTCAGAGATGAACATTGTCTTATGAACTTCCCCTGTGTACTAATAAAATATAGAAAGCACCAGTCTCATGTTGGAAGAAATATGAACAGCGGTCCCATAGGACCACAGGGAATCGAGTCACAGCAGCCGTGATTGCAGTATTACAAATTTGTGGATTAAACTGGCATGGCAACGATAGTTGTTACTGCACATACGGTGTGGGACCAATTTTGAACTTAAACTTGTTAAATCAAGTTTAAACTTGGGACTATCCGCAAGTTTGTGTCACTGCACATGAAAGAGTATTTGGTGTTCTCCCGAATGCTGAAATACTGACATGTTTTGTCGCCCCATGTAGTGTGActgaaaatgtgaagtccaatgCTTACCTTGTTCTCCAACAAGGACTTGGCTGTGTTATGTATGTGTCATTACAAAAGTGCACAAAGATCAGCTCCCGACAGTTAAGTTTCTGTTGTGTGTTATTTGTTAAATCTTTGATTATGCGACAAAGGACGAAGGACCAGTTTTGTCGAATCGGAGTATGTTGCCATATAAAGTGGGAGAAATCGTCAAATACAAACAAACCAAATATAAcccc

Function

NR:

description
UMP-CMP kinase

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0009142 nucleoside triphosphate biosynthetic process biological_process
GO:0006221 pyrimidine nucleotide biosynthetic process biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function

KEGG:

id description
K13800 CMPK1, UMPK; UMP-CMP kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612862.2 True 2020 mRNA 0.46 6 52053382 52059723
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Neighbor

gene id symbol gene type direction distance location
LOC110530067 LOC106568759 coding upstream 4612 52030973 ~ 52048770 (+)
LOC110530065 s22bb coding upstream 29422 52019740 ~ 52023960 (+)
zgc:153115 LOC106568757 coding upstream 65055 51982632 ~ 51988327 (+)
LOC110530063 LOC106568806 coding upstream 141089 51902098 ~ 51912293 (+)
LOC118965524 NA coding upstream 160644 51876133 ~ 51892738 (+)
dis3l2 dis3l2 coding downstream 170955 52230678 ~ 52248262 (+)
LOC110530076 LOC106568765 coding downstream 195411 52255134 ~ 52282393 (+)
agxtb agxt coding downstream 388548 52448271 ~ 52459617 (+)
trnap-ugg-10 NA coding downstream 705778 52765413 ~ 52765655 (+)
LOC110530086 LOC106568992 coding downstream 712212 52771935 ~ 52775359 (+)
G720207 NA non-coding upstream 135156 51916895 ~ 51918226 (+)
G720021 LOC106568752 non-coding upstream 303219 51748697 ~ 51750163 (+)
LOC110530057 LOC106568751 non-coding upstream 322442 51727840 ~ 51736153 (+)
G720008 NA non-coding upstream 331450 51721730 ~ 51721932 (+)
G719621 NA non-coding upstream 350010 51703096 ~ 51703372 (+)
G720301 NA non-coding downstream 9377 52069100 ~ 52069651 (+)
G720443 NA non-coding downstream 46779 52106502 ~ 52106705 (+)
G720448 NA non-coding downstream 49852 52109575 ~ 52109795 (+)
G720449 NA non-coding downstream 50946 52110669 ~ 52110983 (+)
G720466 NA non-coding downstream 65383 52125106 ~ 52125602 (+)
LOC110530024 LOC106568723 other upstream 1412216 50607401 ~ 50641183 (+)
LOC110530019 LOC106568718 other upstream 1659546 50384296 ~ 50397007 (+)
LOC118965615 NA other upstream 2199190 49853027 ~ 49854435 (+)
G716993 LOC100136012 other upstream 2506297 49546212 ~ 49547085 (+)
G716862 NA other upstream 2719610 49332841 ~ 49333772 (+)
G721689 LOC106583873 other downstream 1317509 53377232 ~ 53377705 (+)
mrpl34 mrpl34 other downstream 1610673 53670348 ~ 53674103 (+)
rps28 NA other downstream 1866494 53926018 ~ 53927959 (+)
LOC118965528 LOC106568937 other downstream 2564451 54557953 ~ 54670115 (+)
LOC110530153 LOC106568927 other downstream 3074307 55120291 ~ 55136638 (+)

Expression

cmpk(LOC106568761) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 100.
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cmpk(LOC106568761) Expression in each Bioproject

Bar chart with 21 bars.
cmpk(LOC106568761) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3000.
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Co-expression Network