Gene
RNA
| Item | Value |
|---|---|
| gene id | dis3l2 |
| gene name | dis3l2 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 52230678 ~ 52248262 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| dis3l2 | Predicted to enable 3'-5'-exoribonuclease activity. Acts upstream of or within pronephros development. Predicted to be located in cytoplasm. Predicted to be part of exosome (RNase complex). Predicted to be active in P-body. Is expressed in pronephros. Human ortholog(s) of this gene implicated in Perlman syndrome and nephroblastoma. Orthologous to human DIS3L2 (DIS3 like 3'-5' exoribonuclease 2). |
| description |
|---|
| DIS3-like exonuclease 2 |
| id | description |
|---|---|
| K18758 | DIS3L2; DIS3-like exonuclease 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021612868.2 | False | 5693 | mRNA | 0.48 | 21 | 52230678 | 52248262 |
| XM_036985613.1 | True | 5722 | mRNA | 0.48 | 21 | 52230885 | 52248262 |
52,230,000
52,232,000
52,234,000
52,236,000
52,238,000
52,240,000
52,242,000
52,244,000
52,246,000
52,248,000
52,250,000
52,252,000
52,254,000
52,256,000
52,258,000
52,260,000
52,262,000
52,264,000
52,266,000
52,268,000
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cmpk | LOC106568761 | coding | upstream | 170955 | 52053382 ~ 52059723 (+) |
| LOC110530067 | LOC106568759 | coding | upstream | 181908 | 52030973 ~ 52048770 (+) |
| LOC110530065 | s22bb | coding | upstream | 206718 | 52019740 ~ 52023960 (+) |
| zgc:153115 | LOC106568757 | coding | upstream | 242351 | 51982632 ~ 51988327 (+) |
| LOC110530063 | LOC106568806 | coding | upstream | 318385 | 51902098 ~ 51912293 (+) |
| LOC110530076 | LOC106568765 | coding | downstream | 6872 | 52255134 ~ 52282393 (+) |
| agxtb | agxt | coding | downstream | 200009 | 52448271 ~ 52459617 (+) |
| trnap-ugg-10 | NA | coding | downstream | 517239 | 52765413 ~ 52765655 (+) |
| LOC110530086 | LOC106568992 | coding | downstream | 523673 | 52771935 ~ 52775359 (+) |
| LOC110530088 | hs2st | coding | downstream | 570860 | 52819122 ~ 52851107 (+) |
| G720571 | NA | non-coding | upstream | 10762 | 52219363 ~ 52219916 (+) |
| G720569 | LOC106568763 | non-coding | upstream | 16369 | 52213359 ~ 52214309 (+) |
| G720518 | NA | non-coding | upstream | 72090 | 52158304 ~ 52158588 (+) |
| G720499 | NA | non-coding | upstream | 85578 | 52144898 ~ 52145100 (+) |
| G720498 | NA | non-coding | upstream | 86225 | 52144126 ~ 52144453 (+) |
| G720651 | LOC106568768 | non-coding | downstream | 97824 | 52346086 ~ 52349405 (+) |
| G720664 | NA | non-coding | downstream | 114527 | 52362789 ~ 52410295 (+) |
| G720707 | NA | non-coding | downstream | 190129 | 52438391 ~ 52438650 (+) |
| G720686 | NA | non-coding | downstream | 213013 | 52461275 ~ 52475688 (+) |
| G720716 | NA | non-coding | downstream | 235062 | 52483324 ~ 52711519 (+) |
| LOC110530024 | LOC106568723 | other | upstream | 1589512 | 50607401 ~ 50641183 (+) |
| LOC110530019 | LOC106568718 | other | upstream | 1836842 | 50384296 ~ 50397007 (+) |
| LOC118965615 | NA | other | upstream | 2376486 | 49853027 ~ 49854435 (+) |
| G716993 | LOC100136012 | other | upstream | 2683593 | 49546212 ~ 49547085 (+) |
| G716862 | NA | other | upstream | 2896906 | 49332841 ~ 49333772 (+) |
| G721689 | LOC106583873 | other | downstream | 1128970 | 53377232 ~ 53377705 (+) |
| mrpl34 | mrpl34 | other | downstream | 1422134 | 53670348 ~ 53674103 (+) |
| rps28 | NA | other | downstream | 1677955 | 53926018 ~ 53927959 (+) |
| LOC118965528 | LOC106568937 | other | downstream | 2375912 | 54557953 ~ 54670115 (+) |
| LOC110530153 | LOC106568927 | other | downstream | 2885768 | 55120291 ~ 55136638 (+) |
