Gene
RNA
| Item | Value |
|---|---|
| gene id | trnav-cac-22 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 52503689 ~ 52600136 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interferon-induced protein 44-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnav-cac-22 | False | 73 | mRNA | 0.56 | 1 | 52504084 | 52504156 |
| TU819447 | True | 491 | lncRNA | 0.43 | 2 | 52503689 | 52600136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnav-aac-23 | NA | coding | downstream | 899 | 52503113 ~ 52503185 (-) |
| trnav-cac-21 | NA | coding | downstream | 1101 | 52502911 ~ 52502983 (-) |
| trnav-aac-22 | NA | coding | downstream | 2072 | 52501940 ~ 52502012 (-) |
| trnav-cac-20 | NA | coding | downstream | 2274 | 52501738 ~ 52501810 (-) |
| trnav-aac-21 | NA | coding | downstream | 3245 | 52500767 ~ 52500839 (-) |
| trnav-aac-24 | NA | coding | upstream | 130 | 52504286 ~ 52504358 (-) |
| trnav-aac-25 | NA | coding | upstream | 549 | 52504705 ~ 52504777 (-) |
| trnav-aac-26 | NA | coding | upstream | 1848 | 52506004 ~ 52506076 (-) |
| trnav-aac-27 | NA | coding | upstream | 4120 | 52508276 ~ 52508348 (-) |
| trnav-aac-28 | NA | coding | upstream | 4321 | 52508477 ~ 52508549 (-) |
| G721235 | NA | non-coding | downstream | 13681 | 52483522 ~ 52490403 (-) |
| G721207 | LOC106584099 | non-coding | downstream | 44425 | 52448383 ~ 52459659 (-) |
| G721203 | NA | non-coding | downstream | 94856 | 52408868 ~ 52409228 (-) |
| G721149 | LOC100136012 | non-coding | downstream | 211739 | 52291980 ~ 52292345 (-) |
| G721148 | NA | non-coding | downstream | 212164 | 52291672 ~ 52291920 (-) |
| G721243 | NA | non-coding | upstream | 24247 | 52528403 ~ 52589826 (-) |
| G721245 | NA | non-coding | upstream | 29053 | 52533209 ~ 52668446 (-) |
| G721248 | NA | non-coding | upstream | 35924 | 52540080 ~ 52545734 (-) |
| G721238 | NA | non-coding | upstream | 85063 | 52589219 ~ 52656589 (-) |
| G721260 | NA | non-coding | upstream | 215130 | 52719286 ~ 52726784 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 1245065 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 1564613 | 50936928 ~ 50939471 (-) |
| LOC110530011 | LOC106568709 | other | downstream | 2614832 | 49866272 ~ 49937001 (-) |
| G718489 | NA | other | downstream | 2666388 | 49785674 ~ 49837696 (-) |
| G716488 | NA | other | downstream | 3715122 | 48788521 ~ 48788962 (-) |
| G721275 | NA | other | upstream | 256883 | 52761039 ~ 52761451 (-) |
| LOC110529122 | LOC106568971 | other | upstream | 959026 | 53462034 ~ 53478913 (-) |
| G722459 | NA | other | upstream | 993992 | 53495804 ~ 53499730 (-) |
| G722602 | NA | other | upstream | 1299287 | 53803443 ~ 53856065 (-) |
| G722670 | NA | other | upstream | 1422072 | 53926228 ~ 53927959 (-) |
| trnav-aac-90 | NA | coding | upstream | 107 | 52600243 ~ 52600315 (-) |
| trnav-aac-91 | NA | coding | upstream | 2916 | 52603052 ~ 52603124 (-) |
| trnav-aac-92 | NA | coding | upstream | 4424 | 52604560 ~ 52604632 (-) |
| trnav-cac-33 | NA | coding | upstream | 5730 | 52605866 ~ 52605938 (-) |
| trnav-aac-93 | NA | coding | upstream | 5932 | 52606068 ~ 52606140 (-) |
| G721288 | NA | non-coding | upstream | 178242 | 52778378 ~ 52778596 (-) |
| G721289 | NA | non-coding | upstream | 178900 | 52779036 ~ 52779473 (-) |
| selenof | sep15 | non-coding | upstream | 193181 | 52793317 ~ 52818726 (-) |
| G721414 | NA | non-coding | upstream | 374661 | 52974797 ~ 52977530 (-) |
