XLOC_025811 (CU571328.1)


Basic Information

Item Value
gene id XLOC_025811
gene name CU571328.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 57820913 ~ 57823547 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050686
TTAAACTATTCAACAATGGAATCCACCAGACCTTTATATATTTGCCTTTCTGAAGACCATCAGGAATTTCCAAAATTTGGAGACTGGGATCATGGGATTTTCGTTACGAATCTGAATCCACATTTGACCGACAGCGAGCTCCGCTGCCACTTTGAGAAATTTGGCACAGTTACAGAATGTGTTATAAGGACAGACAGCTCTTCAGGATGGCCAAAGGGTTTGGGCTTTGTGAGATATTCGTCTTCTGGAGAAGCGGCAGCAGCACATGACGCCGGACCTCATTGTGTCGGAGGATTTCAGATACTCCTCAGAAAGGTCATCACACCTAAAaaggTGTATGGCAGCCAGTTGAACGCTCTTCAGGGCCAGTCCTTTCgtgcagatgtgtgtgtgaaCTAGAAGTGGAAAGCCTGAAGAGATTTGCACTCATCTTACATCACCCTGTTCAATGAAATCTGAACTAAATGTGACCTTTCTGTGTGATGCTCCGTCCTTCCATTATCACATTATCAATCTTGTTTTAAAGTCTGTGAAACGCCTGTATTATAagaataactttttatatatatatactttttatactGTGTCTgaaatgtttattacatttatCTTAACTAACACTTTTTTATTGAGTTTGTAATTGTGCTTCGGTGAAAGAAATCCTTTATTTTTAAGGATGTTTCCCCTGAAACTGTGAACATTGACTTAACTCAATCTTTAAATAAAGATCCTCTCTTTCTGTTATCTTTTTGTAGTCCGTTAAGCTGTTTATTACACCCAGTCTCTGAGTAACATAATTGGGCAATCTATCCAGTGATCCCAAACACATTTGGTTCCTATTTTGTTATAATTTGGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102450

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050686 True 856 mRNA 0.39 4 57820913 57823547

Neighbor

gene id symbol gene type direction distance location
XLOC_025810 tmc6a coding upstream 4036 57779673 ~ 57816877 (+)
XLOC_025809 NA coding upstream 52247 57766624 ~ 57768666 (+)
XLOC_025808 CT573423.1 coding upstream 179823 57636374 ~ 57641090 (+)
XLOC_025806 NA coding upstream 339917 57426160 ~ 57480996 (+)
XLOC_025807 NA coding upstream 384609 57434261 ~ 57436304 (+)
XLOC_025812 cenpx coding downstream 2391 57825938 ~ 57830023 (+)
XLOC_025813 notum1a coding downstream 124830 57948377 ~ 57979190 (+)
XLOC_025814 NA coding downstream 157711 57981258 ~ 57986847 (+)
XLOC_025815 myadml2 coding downstream 167527 57991074 ~ 57991985 (+)
XLOC_025816 NA coding downstream 170831 57994378 ~ 57995547 (+)
XLOC_025429 BX649540.1 misc upstream 27571877 30248739 ~ 30249036 (+)
XLOC_025802 NA non-coding upstream 863355 56949955 ~ 56957558 (+)
XLOC_025822 NA non-coding downstream 364440 58187987 ~ 58192699 (+)
XLOC_025823 NA non-coding downstream 365107 58188654 ~ 58193860 (+)
XLOC_025824 NA non-coding downstream 386828 58210375 ~ 58212686 (+)

Expression


Co-expression Network