Gene
RNA
| Item | Value |
|---|---|
| gene id | trnav-cac-79 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 52718244 ~ 52718316 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interferon-induced protein 44-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnav-cac-79 | True | 73 | mRNA | 0.56 | 1 | 52718244 | 52718316 |
52,715,600
52,715,800
52,716,000
52,716,200
52,716,400
52,716,600
52,716,800
52,717,000
52,717,200
52,717,400
52,717,600
52,717,800
52,718,000
52,718,200
52,718,400
52,718,600
52,718,800
52,719,000
52,719,200
52,719,400
52,719,600
52,719,800
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnav-aac-149 | NA | coding | downstream | 899 | 52717273 ~ 52717345 (-) |
| trnav-aac-148 | NA | coding | downstream | 2072 | 52716100 ~ 52716172 (-) |
| trnav-cac-78 | NA | coding | downstream | 2274 | 52715898 ~ 52715970 (-) |
| trnav-aac-147 | NA | coding | downstream | 3245 | 52714927 ~ 52714999 (-) |
| trnav-aac-146 | NA | coding | downstream | 4418 | 52713754 ~ 52713826 (-) |
| trnav-aac-150 | NA | coding | upstream | 130 | 52718446 ~ 52718518 (-) |
| trnav-aac-151 | NA | coding | upstream | 1631 | 52719947 ~ 52720019 (-) |
| trnav-cac-80 | NA | coding | upstream | 2937 | 52721253 ~ 52721325 (-) |
| trnav-cac-81 | NA | coding | upstream | 4243 | 52722559 ~ 52722631 (-) |
| trnav-cac-82 | NA | coding | upstream | 5549 | 52723865 ~ 52723937 (-) |
| G721245 | NA | non-coding | downstream | 49798 | 52533209 ~ 52668446 (-) |
| G721238 | NA | non-coding | downstream | 61655 | 52589219 ~ 52656589 (-) |
| trnav-cac-22 | NA | non-coding | downstream | 118108 | 52503689 ~ 52600136 (-) |
| G721236 | NA | non-coding | downstream | 126288 | 52484057 ~ 52591956 (-) |
| G721260 | NA | non-coding | upstream | 970 | 52719286 ~ 52726784 (-) |
| G721288 | NA | non-coding | upstream | 60062 | 52778378 ~ 52778596 (-) |
| G721289 | NA | non-coding | upstream | 60720 | 52779036 ~ 52779473 (-) |
| selenof | sep15 | non-coding | upstream | 75001 | 52793317 ~ 52818726 (-) |
| G721414 | NA | non-coding | upstream | 256481 | 52974797 ~ 52977530 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 1459225 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 1778773 | 50936928 ~ 50939471 (-) |
| LOC110530011 | LOC106568709 | other | downstream | 2828992 | 49866272 ~ 49937001 (-) |
| G718489 | NA | other | downstream | 2880548 | 49785674 ~ 49837696 (-) |
| G716488 | NA | other | downstream | 3929282 | 48788521 ~ 48788962 (-) |
| G721275 | NA | other | upstream | 42723 | 52761039 ~ 52761451 (-) |
| LOC110529122 | LOC106568971 | other | upstream | 744866 | 53462034 ~ 53478913 (-) |
| G722459 | NA | other | upstream | 779832 | 53495804 ~ 53499730 (-) |
| G722602 | NA | other | upstream | 1085127 | 53803443 ~ 53856065 (-) |
| G722670 | NA | other | upstream | 1207912 | 53926228 ~ 53927959 (-) |
