Item | Value |
---|---|
gene id | LOC110530084 |
gene name | LOC106568816 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 52733010 ~ 52756602 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
septin-2B isoform X1 |
id | name | namespace |
---|---|---|
GO:0007049 | cell cycle | biological_process |
GO:0031105 | septin complex | cellular_component |
GO:0005525 | GTP binding | molecular_function |
id | description |
---|---|
K16942 | SEPT2; septin 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021612885.2 | False | 2741 | mRNA | 0.46 | 13 | 52733010 | 52756561 |
XM_021612882.2 | False | 2808 | mRNA | 0.46 | 13 | 52733010 | 52756595 |
XM_021612883.2 | False | 3047 | mRNA | 0.45 | 14 | 52733010 | 52756602 |
XM_021612884.2 | True | 2942 | mRNA | 0.46 | 14 | 52733010 | 52756602 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
trnav-cac-85 | NA | coding | downstream | 3040 | 52729898 ~ 52729970 (-) |
trnav-cac-84 | NA | coding | downstream | 5980 | 52726958 ~ 52727030 (-) |
trnav-cac-83 | NA | coding | downstream | 7565 | 52725373 ~ 52725445 (-) |
trnav-aac-152 | NA | coding | downstream | 8871 | 52724067 ~ 52724139 (-) |
trnav-cac-82 | NA | coding | downstream | 9073 | 52723865 ~ 52723937 (-) |
selenof | sep15 | coding | upstream | 37143 | 52793317 ~ 52818726 (-) |
LOC110530090 | LOC106568989 | coding | upstream | 149765 | 52906367 ~ 52917437 (-) |
LOC110530094 | LOC106568986 | coding | upstream | 192399 | 52949001 ~ 52967823 (-) |
LOC110530097 | NA | coding | upstream | 242997 | 52999599 ~ 53001669 (-) |
LOC110530096 | LOC106569026 | coding | upstream | 258576 | 53015178 ~ 53018104 (-) |
G721260 | NA | non-coding | downstream | 6226 | 52719286 ~ 52726784 (-) |
G721245 | NA | non-coding | downstream | 64564 | 52533209 ~ 52668446 (-) |
G721238 | NA | non-coding | downstream | 76421 | 52589219 ~ 52656589 (-) |
G721243 | NA | non-coding | downstream | 143184 | 52528403 ~ 52589826 (-) |
G721288 | NA | non-coding | upstream | 21776 | 52778378 ~ 52778596 (-) |
G721289 | NA | non-coding | upstream | 22434 | 52779036 ~ 52779473 (-) |
G721414 | NA | non-coding | upstream | 218195 | 52974797 ~ 52977530 (-) |
G721425 | LOC106568985 | non-coding | upstream | 230315 | 52986917 ~ 52989556 (-) |
LOC110530043 | LOC106568739 | other | downstream | 1473991 | 51252355 ~ 51259061 (-) |
G719151 | NA | other | downstream | 1793539 | 50936928 ~ 50939471 (-) |
LOC110530011 | LOC106568709 | other | downstream | 2843758 | 49866272 ~ 49937001 (-) |
G718489 | NA | other | downstream | 2895314 | 49785674 ~ 49837696 (-) |
G716488 | NA | other | downstream | 3944048 | 48788521 ~ 48788962 (-) |
G721275 | NA | other | upstream | 4437 | 52761039 ~ 52761451 (-) |
LOC110529122 | LOC106568971 | other | upstream | 706580 | 53462034 ~ 53478913 (-) |
G722459 | NA | other | upstream | 741546 | 53495804 ~ 53499730 (-) |
G722602 | NA | other | upstream | 1046841 | 53803443 ~ 53856065 (-) |
G722670 | NA | other | upstream | 1169626 | 53926228 ~ 53927959 (-) |