Item | Value |
---|---|
gene id | LOC110530094 |
gene name | LOC106568986 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 52949001 ~ 52967823 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
zinc finger protein 644-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021612900.2 | False | 3609 | mRNA | 0.39 | 4 | 52949001 | 52953245 |
XM_036985651.1 | False | 2297 | mRNA | 0.43 | 7 | 52949001 | 52967822 |
XM_021612898.2 | False | 4858 | mRNA | 0.43 | 8 | 52949001 | 52967823 |
XM_021612899.2 | True | 4757 | mRNA | 0.43 | 7 | 52949001 | 52967823 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530090 | LOC106568989 | coding | downstream | 31564 | 52906367 ~ 52917437 (-) |
selenof | sep15 | coding | downstream | 130294 | 52793317 ~ 52818726 (-) |
LOC110530084 | LOC106568816 | coding | downstream | 192399 | 52733010 ~ 52756602 (-) |
trnav-cac-85 | NA | coding | downstream | 219031 | 52729898 ~ 52729970 (-) |
trnav-cac-84 | NA | coding | downstream | 221971 | 52726958 ~ 52727030 (-) |
LOC110530097 | NA | coding | upstream | 31776 | 52999599 ~ 53001669 (-) |
LOC110530096 | LOC106569026 | coding | upstream | 47355 | 53015178 ~ 53018104 (-) |
LOC110529119 | LOC106569026 | coding | upstream | 51683 | 53019506 ~ 53022146 (-) |
dipk1aa | LOC106568980 | coding | upstream | 91823 | 53059646 ~ 53067786 (-) |
LOC110530106 | LOC106568974 | coding | upstream | 287374 | 53255197 ~ 53258515 (-) |
G721289 | NA | non-coding | downstream | 169528 | 52779036 ~ 52779473 (-) |
G721288 | NA | non-coding | downstream | 170405 | 52778378 ~ 52778596 (-) |
G721260 | NA | non-coding | downstream | 222217 | 52719286 ~ 52726784 (-) |
G721238 | NA | non-coding | downstream | 292412 | 52589219 ~ 52656589 (-) |
G721414 | NA | non-coding | upstream | 6974 | 52974797 ~ 52977530 (-) |
G721425 | LOC106568985 | non-coding | upstream | 19094 | 52986917 ~ 52989556 (-) |
G721435 | LOC106568983 | non-coding | upstream | 40866 | 53008689 ~ 53010120 (-) |
G721407 | NA | non-coding | upstream | 46795 | 53014618 ~ 53100336 (-) |
G721509 | NA | non-coding | upstream | 156551 | 53124374 ~ 53124686 (-) |
G721275 | NA | other | downstream | 187550 | 52761039 ~ 52761451 (-) |
LOC110530043 | LOC106568739 | other | downstream | 1689982 | 51252355 ~ 51259061 (-) |
G719151 | NA | other | downstream | 2009530 | 50936928 ~ 50939471 (-) |
LOC110530011 | LOC106568709 | other | downstream | 3059749 | 49866272 ~ 49937001 (-) |
G718489 | NA | other | downstream | 3111305 | 49785674 ~ 49837696 (-) |
LOC110529122 | LOC106568971 | other | upstream | 495359 | 53462034 ~ 53478913 (-) |
G722459 | NA | other | upstream | 530325 | 53495804 ~ 53499730 (-) |
G722602 | NA | other | upstream | 835620 | 53803443 ~ 53856065 (-) |
G722670 | NA | other | upstream | 958405 | 53926228 ~ 53927959 (-) |
G722761 | NA | other | upstream | 1156556 | 54124379 ~ 54139341 (-) |