LOC110530096 (LOC106569026)


Basic Information

Item Value
gene id LOC110530096
gene name LOC106569026
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 53015178 ~ 53018104 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612908.2
TGGACGGAGAGGATGTCATCACAAGTGACCAGGGACCTTGAGAGTCACGCAGCGAATAGTAACCATGCCGAGGTCATTTTTGGTGAAGAGTAAACGGGCACATAGCTACCACCAACCCCGATACCTGGATGATGAGTACATACAACTGGATACTAATGTATCCCTTATATGCGCAGAGCGCAAACTGCAGGTTGAGGGGAGCTGTGACGCGCAGGATGCTCATAACCATGGCAAGCGCTCCCCCGAGTCCTATCTAGTGCGCACGGCTGACCTGTTATCCACCTCCCCGCTGAGCCACGAGGGCAACGTGTGCGACCGCTTCCCGGACTATGACTACTACTGGCGCCCTCCATCTGCATCACAAGATTCGGAACCATGTTTCACTCCGTCAGTAGACAACGCTCAACCTTTCGCCATTCCATTCCGTCCTTATGCATGGACTACCTACTCTGGTTCCAAGCTCAGGCACCTTGTGCAGCGAACATACCAACAGAATCTCTCCACAACTCTGGAGCCTGACACACAGATGGGTATCGATGGATCCGAGGATGGTGCCTCCAACTCCCCCATTTACGCACAGCGGGGCCCGCACACAGCATTTTACCGGGACTTTGGGTCTACGGTGTTCCCTACCTATAAAATGTGGGACTCCGACCAATTATACTCGGACCTCAAGGTCTCTAAGATCAAGTCTGAATCCGATCTCATCTGTTCCCGTATAGAGCCAAGCAGATCGTACAAATGCATTAAGTGTTGCAAGGTCTTCTCGACACCGCACGGGTTGGAAGTTCACGTCCGTCGGTCGCACAGCGGAGCACGACCCTTCACCTGTGGAATGTGTTGGAAAACATTTGGGCACGCAGTGAGCTTGGAACAACATAAAGCCGTTCACTCACAGGAGAGGAGCTTCGACTGCAAAATCTGTTGCAAAAGCTTCAAGCGATCGTCCACGCTGTCCACGCACCTGCTCATCCACTCGGACACGCGCCCCTACCCCTGTCAGTACTGCGGTAAGAGATTCCATCAGAAGTCGGACATGAAGAAACACACCTTCATCCATACAGGTGAGAAACCGCACAAGTGCCAGGTATGCGGGAAGGCCTTCAGTCAGAGCTCCAACCTCATCACGCACAGCCGCAAGCACACGGGCTATAAACCGTTCTGCTGCGACCTCTGCGTCAAGGGATTCCAACGGAAAGTGGATCTGAGGAGGCACAAAGACACACAACATGGATTTAAATGAAAAACCGCGAACAGCAAAAATTGTGCTGGAGGATTGAGAAGAAAATAGGCTAATATGGAAGTAAATATGTCAAATTTCAGAGGAAGGATTAACGAATTAATTTGAATAGTATATGCAATTATGTCAatttcaaaatacatttatgcaatACTAGTTTTGTTATAGGCCAAATTGTCTTTAACATTTTACACAAAATACATGATTTAGAAGTGTTGGTTGTGATGCCCAACCAGGCATATTTATATTTGTGCTTAATCTTTTGTATTTTTCCCTGTCAGAAGAAAACGATTAAATGCAATACTACTCAGCAATTTCATGCTTAGTAGGCTATTTGTGAAAATGTCATATTAATCAATTCCCATTCTATTCCAGCTTACATTAAAAATAGTGTGACAGTTATAATTTAACAAAATCCAATATACATTTTTAATGGCCCCTTATCTTTTGTAAAGATAAAGGCTTAAGTTCTAAAGTGCAGGAATCTAAACCAAACATGCTAAAATATATTCTTAATGAATAGTAGGCCTGTCAGTGAGTTGAATGAAGGTGGTGCAGTGGAATTGTCAATTGTTTAAACCTTCTGTATCAACACGTTCTTGAAATGAGCAAGGGAAAAAAAATGAATATACTCACACCCACAAAATTAACATTTTTACTCAAGGCCTACAAGCAAAATGCTTCAGAACTACTAGGCTTTATCTGTATGATCCTAAAATGTTTGAATCAAATACAA

Function

NR:

description
zinc finger protein Gfi-1-like

GO:

id name namespace
GO:0007422 peripheral nervous system development biological_process
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612908.2 True 1976 mRNA 0.45 6 53015178 53018104
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110530097 NA coding downstream 13509 52999599 ~ 53001669 (-)
LOC110530094 LOC106568986 coding downstream 47355 52949001 ~ 52967823 (-)
LOC110530090 LOC106568989 coding downstream 97741 52906367 ~ 52917437 (-)
selenof sep15 coding downstream 196471 52793317 ~ 52818726 (-)
LOC110530084 LOC106568816 coding downstream 258576 52733010 ~ 52756602 (-)
LOC110529119 LOC106569026 coding upstream 1402 53019506 ~ 53022146 (-)
dipk1aa LOC106568980 coding upstream 41542 53059646 ~ 53067786 (-)
LOC110530106 LOC106568974 coding upstream 237093 53255197 ~ 53258515 (-)
nsun4 nsun4 coding upstream 324499 53342603 ~ 53360245 (-)
LOC110529122 LOC106568971 coding upstream 443930 53462034 ~ 53478913 (-)
G721435 LOC106568983 non-coding downstream 5058 53008689 ~ 53010120 (-)
G721425 LOC106568985 non-coding downstream 25622 52986917 ~ 52989556 (-)
G721414 NA non-coding downstream 37648 52974797 ~ 52977530 (-)
G721289 NA non-coding downstream 235705 52779036 ~ 52779473 (-)
G721509 NA non-coding upstream 106270 53124374 ~ 53124686 (-)
G721464 LOC106568976 non-coding upstream 131389 53149493 ~ 53152132 (-)
G721515 NA non-coding upstream 134573 53152677 ~ 53152971 (-)
G721516 NA non-coding upstream 135019 53153123 ~ 53153362 (-)
G721472 NA non-coding upstream 165618 53183722 ~ 53184178 (-)
G721275 NA other downstream 253727 52761039 ~ 52761451 (-)
LOC110530043 LOC106568739 other downstream 1756159 51252355 ~ 51259061 (-)
G719151 NA other downstream 2075707 50936928 ~ 50939471 (-)
LOC110530011 LOC106568709 other downstream 3125926 49866272 ~ 49937001 (-)
G718489 NA other downstream 3177482 49785674 ~ 49837696 (-)
G722459 NA other upstream 480044 53495804 ~ 53499730 (-)
G722602 NA other upstream 785339 53803443 ~ 53856065 (-)
G722670 NA other upstream 908124 53926228 ~ 53927959 (-)
G722761 NA other upstream 1106275 54124379 ~ 54139341 (-)

Expression

LOC110530096(LOC106569026) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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LOC110530096(LOC106569026) Expression in each Bioproject

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LOC110530096(LOC106569026) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network