Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529122 |
| gene name | LOC106568971 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 53462034 ~ 53478913 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: artemin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021611263.2 | False | 2821 | mRNA | 0.48 | 5 | 53462034 | 53478913 |
| XM_036985658.1 | False | 2700 | mRNA | 0.48 | 5 | 53462034 | 53478913 |
| TU820028 | False | 430 | lncRNA | 0.41 | 1 | 53462423 | 53462852 |
| TU820029 | False | 390 | TUCP | 0.61 | 2 | 53463182 | 53463764 |
| TU820041 | True | 236 | lncRNA | 0.61 | 3 | 53463800 | 53477483 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nsun4 | nsun4 | coding | downstream | 101789 | 53342603 ~ 53360245 (-) |
| LOC110530106 | LOC106568974 | coding | downstream | 203519 | 53255197 ~ 53258515 (-) |
| dipk1aa | LOC106568980 | coding | downstream | 394248 | 53059646 ~ 53067786 (-) |
| LOC110529119 | LOC106569026 | coding | downstream | 439888 | 53019506 ~ 53022146 (-) |
| LOC110530096 | LOC106569026 | coding | downstream | 443930 | 53015178 ~ 53018104 (-) |
| LOC110530111 | LOC106598945 | coding | upstream | 21543 | 53500456 ~ 53585621 (-) |
| LOC118965526 | NA | coding | upstream | 48690 | 53527596 ~ 53533919 (-) |
| LOC110530113 | LOC106598949 | coding | upstream | 120722 | 53599635 ~ 53635592 (-) |
| LOC110530114 | LOC106568966 | coding | upstream | 156875 | 53635788 ~ 53709367 (-) |
| LOC110530116 | tm16h | coding | upstream | 202695 | 53681608 ~ 53712234 (-) |
| G721782 | NA | non-coding | downstream | 4008 | 53457822 ~ 53458026 (-) |
| G721766 | NA | non-coding | downstream | 17949 | 53443792 ~ 53444085 (-) |
| G721747 | NA | non-coding | downstream | 31082 | 53430703 ~ 53430952 (-) |
| G721704 | NA | non-coding | downstream | 74354 | 53387475 ~ 53387680 (-) |
| G721685 | LOC106594194 | non-coding | downstream | 85787 | 53376030 ~ 53376247 (-) |
| G721825 | NA | non-coding | upstream | 1980 | 53480893 ~ 53481125 (-) |
| G722459 | NA | non-coding | upstream | 16891 | 53495804 ~ 53499730 (-) |
| G722488 | NA | non-coding | upstream | 116643 | 53595556 ~ 53595773 (-) |
| G721275 | NA | other | downstream | 700583 | 52761039 ~ 52761451 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 2203015 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 2522563 | 50936928 ~ 50939471 (-) |
| LOC110530011 | LOC106568709 | other | downstream | 3572782 | 49866272 ~ 49937001 (-) |
| G718489 | NA | other | downstream | 3624338 | 49785674 ~ 49837696 (-) |
| G722602 | NA | other | upstream | 324530 | 53803443 ~ 53856065 (-) |
| G722670 | NA | other | upstream | 447315 | 53926228 ~ 53927959 (-) |
| G722761 | NA | other | upstream | 645466 | 54124379 ~ 54139341 (-) |
| G722854 | NA | other | upstream | 772201 | 54251114 ~ 54251546 (-) |
