Item | Value |
---|---|
gene id | LOC110530934 |
gene name | LOC106568959 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 53818706 ~ 53880785 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: small conductance calcium-activated potassium channel protein 2-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036985674.1 | False | 4617 | mRNA | 0.52 | 10 | 53818706 | 53880779 |
XM_036985675.1 | False | 4608 | mRNA | 0.52 | 9 | 53818706 | 53880779 |
XM_036985672.1 | False | 4710 | mRNA | 0.52 | 10 | 53818706 | 53880781 |
XM_036985676.1 | False | 3208 | mRNA | 0.54 | 8 | 53825024 | 53880783 |
XM_036985677.1 | False | 2966 | mRNA | 0.56 | 9 | 53825024 | 53880785 |
TU820885 | True | 729 | lncRNA | 0.44 | 3 | 53825024 | 53828481 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ocel1 | LOC106568960 | coding | downstream | 6514 | 53806663 ~ 53812192 (-) |
plvapa | LOC106568963 | coding | downstream | 90035 | 53722172 ~ 53728671 (-) |
LOC110530116 | tm16h | coding | downstream | 106472 | 53681608 ~ 53712234 (-) |
trnak-cuu-2 | NA | coding | downstream | 122006 | 53696628 ~ 53696700 (-) |
LOC110530114 | LOC106568966 | coding | downstream | 158700 | 53635788 ~ 53709367 (-) |
insl3 | NA | coding | upstream | 34035 | 53914820 ~ 53917617 (-) |
LOC110530121 | LOC106568956 | coding | upstream | 85212 | 53965997 ~ 53995304 (-) |
LOC110530123 | rps15 | coding | upstream | 120344 | 54001129 ~ 54003188 (-) |
LOC118965682 | NA | coding | upstream | 121649 | 54002434 ~ 54002567 (-) |
cnn2 | cnn2 | coding | upstream | 127649 | 54008434 ~ 54014434 (-) |
G722523 | NA | non-coding | downstream | 138711 | 53677925 ~ 53679995 (-) |
G722488 | NA | non-coding | downstream | 222933 | 53595556 ~ 53595773 (-) |
LOC118965526 | NA | non-coding | downstream | 284787 | 53527596 ~ 53533919 (-) |
G722459 | NA | non-coding | downstream | 321279 | 53495804 ~ 53499730 (-) |
G722659 | NA | non-coding | upstream | 24363 | 53905148 ~ 53905462 (-) |
G722686 | NA | non-coding | upstream | 63809 | 53944594 ~ 53944946 (-) |
G722694 | NA | non-coding | upstream | 71410 | 53952195 ~ 53952400 (-) |
G722696 | NA | non-coding | upstream | 73412 | 53954197 ~ 53954429 (-) |
G722699 | NA | non-coding | upstream | 84391 | 53965176 ~ 53965407 (-) |
LOC110529122 | LOC106568971 | other | downstream | 354942 | 53462034 ~ 53478913 (-) |
G721275 | NA | other | downstream | 1057255 | 52761039 ~ 52761451 (-) |
LOC110530043 | LOC106568739 | other | downstream | 2559687 | 51252355 ~ 51259061 (-) |
G719151 | NA | other | downstream | 2879235 | 50936928 ~ 50939471 (-) |
G722670 | NA | other | upstream | 45443 | 53926228 ~ 53927959 (-) |
G722761 | NA | other | upstream | 243594 | 54124379 ~ 54139341 (-) |
G722854 | NA | other | upstream | 370329 | 54251114 ~ 54251546 (-) |
G722864 | LOC106581475 | other | upstream | 400900 | 54281685 ~ 54281978 (-) |
G723955 | NA | other | upstream | 1496496 | 55377281 ~ 55377776 (-) |
G722612 | NA | non-coding | upstream | 198 | 53828679 ~ 53829059 (-) |